doi:10.1186/1471-2105-15-311>, these sequences are used to run examples.">

BASiNETEntropy: Classification of RNA Sequences using Complex Network and Information Theory (original) (raw)

It makes the creation of networks from sequences of RNA, with this is done the abstraction of characteristics of these networks with a methodology of maximum entropy for the purpose of making a classification between the classes of the sequences. There are two data present in the 'BASiNET' package, "mRNA", and "ncRNA" with 10 sequences. These sequences were taken from the data set used in the article (LI, Aimin; ZHANG, Junying; ZHOU, Zhongyin, 2014) <doi:10.1186/1471-2105-15-311>, these sequences are used to run examples.

Version: 0.99.6
Depends: R (≥ 4.1.0)
Imports: igraph, Biostrings, randomForest
Suggests: knitr, rmarkdown
Published: 2023-08-16
DOI: 10.32614/CRAN.package.BASiNETEntropy
Author: Murilo Montanini BreveORCID iD [aut], Matheus Henrique Pimenta-ZanonORCID iD [aut], Fabricio Martins LopesORCID iD [aut, cre]
Maintainer: Fabricio Martins Lopes
License: GPL-3
NeedsCompilation: no
Materials: README
In views: NetworkAnalysis
CRAN checks: BASiNETEntropy results

Documentation:

Downloads:

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=BASiNETEntropyto link to this page.