DFD: Extract Drugs from Differential Expression Data from LINCS Database (original) (raw)
Get Drug information from given differential expression profile. The package search for the bioactive compounds from reference databases such as LINCS containing the genome-wide gene expression signature (GES) from tens of thousands of drug and genetic perturbations (Subramanian et al. (2017) <doi:10.1016/j.cell.2017.10.049>).
| Version: | 0.3.0 |
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| Depends: | signatureSearch, signatureSearchData |
| Imports: | stringr, gprofiler2, scales, ggplot2, gridExtra, ggpubr |
| Published: | 2025-02-11 |
| DOI: | 10.32614/CRAN.package.DFD |
| Author: | Mohamed Soudy [aut, cre] |
| Maintainer: | Mohamed Soudy |
| BugReports: | https://github.com/MohmedSoudy/DFD/issues |
| License: | GPL-3 |
| URL: | https://github.com/MohmedSoudy/DFD |
| NeedsCompilation: | no |
| CRAN checks: | DFD results |
Documentation:
| Reference manual: | DFD.pdf |
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Downloads:
| Package source: | DFD_0.3.0.tar.gz |
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| Windows binaries: | r-devel: DFD_0.3.0.zip, r-release: DFD_0.3.0.zip, r-oldrel: DFD_0.3.0.zip |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): DFD_0.3.0.tgz |
| Old sources: | DFD archive |
Linking:
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