DiffCorr: Analyzing and Visualizing Differential Correlation Networks in Biological Data (original) (raw)
A method for identifying pattern changes between 2 experimental conditions in correlation networks (e.g., gene co-expression networks), which builds on a commonly used association measure, such as Pearson's correlation coefficient. This package includes functions to calculate correlation matrices for high-dimensional dataset and to test differential correlation, which means the changes in the correlation relationship among variables (e.g., genes and metabolites) between 2 experimental conditions.
Version: | 0.4.5 |
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Depends: | R (≥ 3.5.0), fdrtool, igraph, multtest, pcaMethods |
Imports: | graphics, grDevices, stats, utils |
Suggests: | knitr, prettydoc, rmarkdown, testthat (≥ 3.0.0) |
Published: | 2025-06-08 |
DOI: | 10.32614/CRAN.package.DiffCorr |
Author: | Atsushi Fukushima [aut, cre], Kozo Nishida [aut] |
Maintainer: | Atsushi Fukushima |
License: | GPL-3 |
NeedsCompilation: | no |
Language: | en-US |
Materials: | README NEWS |
In views: | Omics |
CRAN checks: | DiffCorr results |
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