DysPIA: Dysregulated Pathway Identification Analysis (original) (raw)
It is used to identify dysregulated pathways based on a pre-ranked gene pair list. A fast algorithm is used to make the computation really fast. The data in package 'DysPIAData' is needed.
| Version: | 1.3 |
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| Depends: | R (≥ 3.5.0), DysPIAData |
| Imports: | Rcpp (≥ 1.0.4), BiocParallel, fastmatch, data.table, stats, parmigene |
| LinkingTo: | Rcpp |
| Published: | 2020-07-10 |
| DOI: | 10.32614/CRAN.package.DysPIA |
| Author: | Limei Wang [aut, cre], Jin Li [aut, ctb] |
| Maintainer: | Limei Wang |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | yes |
| In views: | Omics |
| CRAN checks: | DysPIA results |
Documentation:
| Reference manual: | DysPIA.pdf |
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Downloads:
| Package source: | DysPIA_1.3.tar.gz |
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| Windows binaries: | r-devel: DysPIA_1.3.zip, r-release: DysPIA_1.3.zip, r-oldrel: DysPIA_1.3.zip |
| macOS binaries: | r-release (arm64): DysPIA_1.3.tgz, r-oldrel (arm64): DysPIA_1.3.tgz, r-release (x86_64): DysPIA_1.3.tgz, r-oldrel (x86_64): DysPIA_1.3.tgz |
| Old sources: | DysPIA archive |
Linking:
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