GeneNet: Modeling and Inferring Gene Networks (original) (raw)
Analyzes gene expression (time series) data with focus on the inference of gene networks. In particular, GeneNet implements the methods of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).
| Version: | 1.2.17 |
|---|---|
| Depends: | R (≥ 3.4.0), corpcor (≥ 1.6.10), longitudinal (≥ 1.1.13), fdrtool (≥ 1.2.18) |
| Imports: | stats, grDevices |
| Suggests: | graph, Rgraphviz |
| Published: | 2025-04-07 |
| DOI: | 10.32614/CRAN.package.GeneNet |
| Author: | Juliane Schaefer [aut], Rainer Opgen-Rhein [aut], Korbinian Strimmer [aut, cre] |
| Maintainer: | Korbinian Strimmer |
| License: | GPL (≥ 3) |
| URL: | https://strimmerlab.github.io/software/genenet/ |
| NeedsCompilation: | no |
| Materials: | |
| In views: | GraphicalModels, Omics |
| CRAN checks: | GeneNet results |
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