MIDASim: Simulating Realistic Microbiome Data using 'MIDASim' (original) (raw)
The 'MIDASim' package is a microbiome data simulator for generating realistic microbiome datasets by adapting a user-provided template. It supports the controlled introduction of experimental signals-such as shifts in taxon relative abundances, prevalence, and sample library sizes-to create distinct synthetic populations under diverse simulation scenarios. For more details, see He et al. (2024) <doi:10.1186/s40168-024-01822-z>.
| Version: | 2.0 |
|---|---|
| Depends: | R (≥ 3.5.0) |
| Imports: | psych, MASS, pracma, scam, stats |
| Suggests: | vegan, phyloseq, rmarkdown, knitr, roxygen2, testthat |
| Published: | 2025-07-05 |
| DOI: | 10.32614/CRAN.package.MIDASim |
| Author: | Mengyu He [aut, cre] |
| Maintainer: | Mengyu He |
| BugReports: | https://github.com/mengyu-he/MIDASim/issues |
| License: | GPL-2 |
| URL: | https://github.com/mengyu-he/MIDASim |
| NeedsCompilation: | no |
| CRAN checks: | MIDASim results |
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