SigTree: Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree (original) (raw)

Provides tools to identify and visualize branches in a phylogenetic tree that are significantly responsive to some intervention, taking as primary inputs a phylogenetic tree (of class phylo) and a data frame (or matrix) of corresponding tip (OTU) labels and p-values.

Version: 1.10.6
Imports: ape, phylobase, phyext2, RColorBrewer, phyloseq, graphics, utils, stats, MASS, vegan
Published: 2017-10-02
DOI: 10.32614/CRAN.package.SigTree
Author: John R. Stevens and Todd R. Jones
Maintainer: John R. Stevens <john.r.stevens at usu.edu>
License: GPL-3
NeedsCompilation: yes
Citation: SigTree citation info
Materials:
In views: Phylogenetics
CRAN checks: SigTree results [issues need fixing before 2025-06-28]

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