SubVis: Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices (original) (raw)

Substitution matrices are important parameters in protein alignment algorithms. These matrices represent the likelihood that an amino acid will be substituted for another during mutation. This tool allows users to apply predefined and custom matrices and then explore the resulting alignments with interactive visualizations. 'SubVis' requires the availability of a web browser.

Version: 2.0.2
Depends: R (≥ 3.3.0), shiny, Biostrings
Suggests: knitr, rmarkdown
Published: 2017-05-23
DOI: 10.32614/CRAN.package.SubVis
Author: Scott Barlowe
Maintainer: Scott Barlowe
License: GPL-3
NeedsCompilation: no
CRAN checks: SubVis results

Documentation:

Downloads:

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=SubVisto link to this page.