https://www.genenames.org>, authors limma (2015) <doi:10.1093/nar/gkv007> to find the correspondence between evolving nomenclature of human gene symbols, aliases, previous symbols or synonyms with stable, curated gene entrezID from NCBI database. This allows fast, accurate and up-to-date correspondence between human gene expression datasets from various date and platform (e.g: gene symbol: BRCA1 - ID: 672).">

aliases2entrez: Converts Human gene symbols to entrez IDs (original) (raw)

Queries multiple resources authors HGNC (2019) <https://www.genenames.org>, authors limma (2015) <doi:10.1093/nar/gkv007> to find the correspondence between evolving nomenclature of human gene symbols, aliases, previous symbols or synonyms with stable, curated gene entrezID from NCBI database. This allows fast, accurate and up-to-date correspondence between human gene expression datasets from various date and platform (e.g: gene symbol: BRCA1 - ID: 672).

Version: 0.1.2
Imports: doParallel, limma, utils, org.Hs.eg.db, AnnotationDbi, parallel, foreach, readr, RCurl
Suggests: spelling
Published: 2021-02-15
DOI: 10.32614/CRAN.package.aliases2entrez
Author: Raphael Bonnet [aut, cre] (Université Côte d’Azur), Lee Mariault [ctb] (Université Côte d’Azur), Jean-François Peyron [aut] (Inserm)
Maintainer: Raphael Bonnet <raphael.bonnet at univ-cotedazur.fr>
BugReports: https://github.com/peyronlab/aliases2entrez/issues
License: MIT + file
NeedsCompilation: no
Language: en-US
Materials:
In views: Omics
CRAN checks: aliases2entrez results

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