chemodiv: Analysing Chemodiversity of Phytochemical Data (original) (raw)
Quantify and visualise various measures of chemical diversity and dissimilarity, for phytochemical compounds and other sets of chemical composition data. Importantly, these measures can incorporate biosynthetic and/or structural properties of the chemical compounds, resulting in a more comprehensive quantification of diversity and dissimilarity. For details, see Petrén, Köllner and Junker (2023) <doi:10.1111/nph.18685>.
| Version: | 0.3.0 |
|---|---|
| Depends: | R (≥ 2.10) |
| Imports: | jsonlite, httr, vegan, webchem, fmcsR, ChemmineR, hillR, ape, GUniFrac, tidygraph, igraph, ggraph, ggplot2, gridExtra, ggdendro, tidyr, rlang, curl |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2023-08-17 |
| DOI: | 10.32614/CRAN.package.chemodiv |
| Author: | Hampus Petrén  [aut, cre], Tobias G. Köllner [aut], Robert R. Junker [aut] |
| Maintainer: | Hampus Petrén <hampus.petren at gmail.com> |
| BugReports: | https://github.com/hpetren/chemodiv/issues |
| License: | GPL (≥ 3) |
| URL: | https://github.com/hpetren/chemodiv |
| NeedsCompilation: | no |
| Citation: | chemodiv citation info |
| Materials: | README NEWS |
| CRAN checks: | chemodiv results |
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