chromConverter: Chromatographic File Converter (original) (raw)
Reads chromatograms from binary formats into R objects. Currently supports conversion of 'Agilent ChemStation', 'Agilent MassHunter', 'Shimadzu LabSolutions', 'ThermoRaw', and 'Varian Workstation' files as well as various text-based formats. In addition to its internal parsers, chromConverter contains bindings to parsers in external libraries, such as 'Aston' <https://github.com/bovee/aston>, 'Entab' <https://github.com/bovee/entab>, 'rainbow' <https://rainbow-api.readthedocs.io/>, and 'ThermoRawFileParser' <https://github.com/compomics/ThermoRawFileParser>.
| Version: | 0.7.5 |
|---|---|
| Depends: | R (≥ 4.1.0) |
| Imports: | bitops, fs, purrr, readxl, reticulate (≥ 1.41.0), stringr, tidyr, utils, RaMS, tibble, xml2, bit64, data.table, base64enc, jsonlite, digest |
| Suggests: | entab, ncdf4, pbapply, testthat (≥ 3.0.0), mzR, chromConverterExtraTests |
| Published: | 2025-03-31 |
| DOI: | 10.32614/CRAN.package.chromConverter |
| Author: | Ethan Bass  [aut, cre], James Dillon [ctb, cph] (Author and copyright holder of source code adapted from the 'Chromatography Toolbox' for parsing 'Agilent' FID files.), Evan Shi [ctb, cph] (Author and copyright holder of source code adapted from 'rainbow' for parsing 'Agilent' UV files.) |
| Maintainer: | Ethan Bass |
| BugReports: | https://github.com/ethanbass/chromConverter/issues/ |
| License: | GPL (≥ 3) |
| URL: | https://ethanbass.github.io/chromConverter/,https://github.com/ethanbass/chromConverter/ |
| NeedsCompilation: | no |
| Additional_repositories: | https://ethanbass.github.io/drat/,https://ethanbass.r-universe.dev/ |
| Language: | en-US |
| Citation: | chromConverter citation info |
| Materials: | README NEWS |
| In views: | ChemPhys |
| CRAN checks: | chromConverter results |
Documentation:
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