genekitr: Gene Analysis Toolkit (original) (raw)
Provides features for searching, converting, analyzing, plotting, and exporting data effortlessly by inputting feature IDs. Enables easy retrieval of feature information, conversion of ID types, gene enrichment analysis, publication-level figures, group interaction plotting, and result export in one Excel file for seamless sharing and communication.
| Version: | 1.2.8 |
|---|---|
| Depends: | R (≥ 3.6) |
| Imports: | clusterProfiler, dplyr, europepmc, fst, geneset, ggplot2, ggraph, ggvenn, igraph, magrittr, openxlsx, stringr, stringi, tidyr, rlang |
| Suggests: | AnnotationDbi, cowplot, ComplexUpset, forcats, fgsea, futile.logger, ggplotify, ggsci, ggrepel, ggridges, ggnewscale, GOplot, GOSemSim, labeling, pheatmap, tm, treemap, RColorBrewer, RCurl, reshape2, rio, rrvgo, testthat (≥ 3.0.0), wordcloud, knitr, rmarkdown, XML, xml2, httr |
| Published: | 2024-09-06 |
| DOI: | 10.32614/CRAN.package.genekitr |
| Author: | Yunze Liu [aut, cre] |
| Maintainer: | Yunze Liu |
| BugReports: | https://github.com/GangLiLab/genekitr/issues |
| License: | GPL-3 |
| URL: | https://www.genekitr.fun/ |
| NeedsCompilation: | no |
| Materials: | README, |
| CRAN checks: | genekitr results |
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