inferCSN: Inferring Cell-Specific Gene Regulatory Network (original) (raw)
An R package for inferring cell-type specific gene regulatory network from single-cell RNA data.
Version: | 1.1.7 |
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Depends: | R (≥ 4.1.0) |
Imports: | cli, dplyr, doParallel, foreach, ggnetwork, ggplot2, ggraph, Matrix, methods, parallel, pbapply, purrr, Rcpp, RcppArmadillo, RcppParallel, stats |
LinkingTo: | Rcpp, RcppArmadillo, RcppParallel |
Suggests: | ComplexHeatmap, circlize, gtools, gganimate, ggExtra, ggpointdensity, ggpubr, igraph, irlba, network, patchwork, plotly, precrec, pROC, proxy, tidygraph, RANN, RColorBrewer, Rtsne, RTransferEntropy, uwot, viridis |
Published: | 2025-03-30 |
DOI: | 10.32614/CRAN.package.inferCSN |
Author: | Meng Xu |
Maintainer: | Meng Xu |
BugReports: | https://github.com/mengxu98/inferCSN/issues |
License: | MIT + file |
URL: | https://mengxu98.github.io/inferCSN/ |
NeedsCompilation: | yes |
Language: | en-US |
Citation: | inferCSN citation info |
Materials: | README |
CRAN checks: | inferCSN results |
Documentation:
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