inferCSN: Inferring Cell-Specific Gene Regulatory Network (original) (raw)
An R package for inferring cell-type specific gene regulatory network from single-cell RNA data.
| Version: | 1.1.7 |
|---|---|
| Depends: | R (≥ 4.1.0) |
| Imports: | cli, dplyr, doParallel, foreach, ggnetwork, ggplot2, ggraph, Matrix, methods, parallel, pbapply, purrr, Rcpp, RcppArmadillo, RcppParallel, stats |
| LinkingTo: | Rcpp, RcppArmadillo, RcppParallel |
| Suggests: | ComplexHeatmap, circlize, gtools, gganimate, ggExtra, ggpointdensity, ggpubr, igraph, irlba, network, patchwork, plotly, precrec, pROC, proxy, tidygraph, RANN, RColorBrewer, Rtsne, RTransferEntropy, uwot, viridis |
| Published: | 2025-03-30 |
| DOI: | 10.32614/CRAN.package.inferCSN |
| Author: | Meng Xu  [aut, cre] |
| Maintainer: | Meng Xu |
| BugReports: | https://github.com/mengxu98/inferCSN/issues |
| License: | MIT + file |
| URL: | https://mengxu98.github.io/inferCSN/ |
| NeedsCompilation: | yes |
| Language: | en-US |
| Citation: | inferCSN citation info |
| Materials: | README |
| CRAN checks: | inferCSN results |
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