microbial: Do 16s Data Analysis and Generate Figures (original) (raw)
Provides functions to enhance the available statistical analysis procedures in R by providing simple functions to analysis and visualize the 16S rRNA data.Here we present a tutorial with minimum working examples to demonstrate usage and dependencies.
| Version: | 0.0.21 |
|---|---|
| Depends: | R (≥ 3.5.0) |
| Imports: | dplyr, plyr, magrittr, broom, phyloseq, vegan, rlang, ggplot2, ggpubr, DESeq2, SummarizedExperiment, S4Vectors, rstatix, tidyr, phangorn, randomForest, edgeR |
| Suggests: | markdown, dada2, rmarkdown, knitr, tools, Biostrings, DECIPHER, MASS, testthat |
| Published: | 2024-05-15 |
| DOI: | 10.32614/CRAN.package.microbial |
| Author: | Kai Guo [aut, cre], Pan Gao [aut] |
| Maintainer: | Kai Guo |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | microbial results |
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