rrBLUP: Ridge Regression and Other Kernels for Genomic Selection (original) (raw)
Software for genomic prediction with the RR-BLUP mixed model (Endelman 2011, <doi:10.3835/plantgenome2011.08.0024>). One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.
| Version: | 4.6.3 |
|---|---|
| Depends: | R (≥ 4.0) |
| Imports: | stats, graphics, grDevices, parallel |
| Published: | 2023-12-10 |
| DOI: | 10.32614/CRAN.package.rrBLUP |
| Author: | Jeffrey Endelman |
| Maintainer: | Jeffrey Endelman |
| License: | GPL-3 |
| URL: | <https://potatobreeding.cals.wisc.edu/software/> |
| NeedsCompilation: | no |
| Citation: | rrBLUP citation info |
| Materials: | |
| In views: | Agriculture, MixedModels |
| CRAN checks: | rrBLUP results |
Documentation:
Downloads:
Reverse dependencies:
| Reverse imports: | BWGS, factReg, Ghat, GROAN, PopVar, RAINBOWR |
|---|---|
| Reverse suggests: | BG2, dartR, dartR.base, dartR.captive, dartR.spatial, GWAS.BAYES, MoBPS, polyRAD |
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