scBio: Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data (original) (raw)
Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.
| Version: | 0.1.6 |
|---|---|
| Depends: | R (≥ 2.10) |
| Imports: | sp, foreach, parallel, doSNOW, raster, fields, LiblineaR, limma |
| Published: | 2020-05-20 |
| DOI: | 10.32614/CRAN.package.scBio |
| Author: | Amit Frishberg [aut, cre], Naama Peshes-Yaloz [aut], Irit Gat-Viks [aut] |
| Maintainer: | Amit Frishberg |
| BugReports: | https://github.com/amitfrish/scBio/issues |
| License: | GPL-2 |
| URL: | https://github.com/amitfrish/scBio |
| NeedsCompilation: | no |
| Citation: | scBio citation info |
| In views: | Omics |
| CRAN checks: | scBio results |
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