tidyHeatmap: A Tidy Implementation of Heatmap (original) (raw)

This is a tidy implementation for heatmap. At the moment it is based on the (great) package 'ComplexHeatmap'. The goal of this package is to interface a tidy data frame with this powerful tool. Some of the advantages are: Row and/or columns colour annotations are easy to integrate just specifying one parameter (column names). Custom grouping of rows is easy to specify providing a grouped tbl. For example: df %>% group_by(...). Labels size adjusted by row and column total number. Default use of Brewer and Viridis palettes.

Version:

1.11.6

Depends:

R (≥ 4.3.0)

Imports:

methods, stats, utils, dplyr (≥ 0.8.5), magrittr (≥ 1.5), tidyr (≥ 1.0.3), rlang (≥ 0.4.5), purrr (≥ 0.3.3), tibble, ComplexHeatmap (≥ 2.2.0), viridis (≥ 0.5.1), circlize (≥ 0.4.8), RColorBrewer (≥ 1.1), grid, grDevices, lifecycle (≥ 0.2.0), dendextend, patchwork

Suggests:

spelling, testthat, vdiffr, BiocManager, knitr, rmarkdown, qpdf, covr, roxygen2, forcats, ggplot2

Published:

2025-02-08

DOI:

10.32614/CRAN.package.tidyHeatmap

Author:

Stefano Mangiola [aut, cre], Anthony Papenfuss [ctb]

Maintainer:

Stefano Mangiola

BugReports:

https://github.com/stemangiola/tidyHeatmap/issues

License:

GPL-3

URL:

https://www.r-project.org,https://github.com/stemangiola/tidyHeatmap

NeedsCompilation:

no

Language:

en-US

Citation:

tidyHeatmap citation info

Materials:

README

CRAN checks:

tidyHeatmap results