Common Workflow Language (original) (raw)
El Common Workflow Language (CWL) és un estàndard per descriure fluxos de treball computacionals d'anàlisis de dades. El desenvolupament del CWL està enfocat sobretot per a usos intensius de dades, com el que es donen a la bioinformàtica, amb imatges mèdiques, a l'astronomia, a la física o a la química. Un dels objectius clau del CWL és que el flux de treball pugui ser portable i, per tant, reproduïble en entorns computacionals diferents.
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|---|---|
| dbo:abstract | El Common Workflow Language (CWL) és un estàndard per descriure fluxos de treball computacionals d'anàlisis de dades. El desenvolupament del CWL està enfocat sobretot per a usos intensius de dades, com el que es donen a la bioinformàtica, amb imatges mèdiques, a l'astronomia, a la física o a la química. Un dels objectius clau del CWL és que el flux de treball pugui ser portable i, per tant, reproduïble en entorns computacionals diferents. El CWL sorgeix de les de discussions durant el 2014 entre Peter Amstutz, John Chilton, Nebojsa Tijanic, i Michael R. Crusoe (dels programes Galaxy, Arvados, i Seven Bridges) durant la conferència BOSC 2014 de l'. CWL és compatible amb diferents entorns, com ara com Apache Airflow (gràcies a CWL-Airflow ), Arvados, Rabix, i Toil, i va ser considerat el 2017 com una de les tendències futures en el desenvolupament d'eines d'anàlisis bioinformàtiques. Altres entorns que poden utilitzar CWL són: , Cromwell workflow Engine, , i REANA - Reusable Analyses. (ca) The Common Workflow Language (CWL) is a standard for describing computational data-analysis workflows. Development of CWL is focused particularly on serving the data-intensive sciences, such as Bioinformatics, Medical Imaging, Astronomy, Physics, and Chemistry. A key goal of the CWL is to allow the creation of a workflow that is portable and thus may be run reproducibly in different computational environments. The CWL originated from discussions in 2014 between Peter Amstutz, John Chilton, Nebojša Tijanić, and Michael R. Crusoe (at that time their respective affiliations were: Galaxy, Arvados, Seven Bridges, and Michigan State University) at the Open Bioinformatics Foundation BOSC 2014 codefest. CWL is supported by multiple analysis runners and platforms such as Apache Airflow (via CWL-Airflow ), Arvados, Rabix, Cromwell workflow engine, Toil, REANA - Reusable Analyses and CWLEXEC for IBM Spectrum LSF, and was identified in 2017 as one of the future trends for bioinformatics pipeline development. Several additional analysis environments are currently implementing support for CWL including Pegasus and Galaxy. (en) |
| dbo:thumbnail | wiki-commons:Special:FilePath/CWL-Logo-4k.png?width=300 |
| dbo:wikiPageExternalLink | http://rabix.io/ http://toil.ucsc-cgl.org/ https://arvados.org/ https://reana.readthedocs.io/ https://www.commonwl.org/ https://www.open-bio.org/wiki/Codefest_2014 https://www.standict.eu/standards-repository/cwl-common-workflow-language-standards-v12 https://cromwell.readthedocs.io https://orcid.org/0000-0001-8316-4067 https://orcid.org/0000-0002-2961-9670 https://orcid.org/0000-0002-6794-0756 https://orcid.org/0000-0003-3566-7705 https://www.commonwl.org/v1.2/ https://doi.org/10.6084/m9.figshare.3115156.v2 https://github.com/Barski-lab/cwl-airflow https://github.com/IBMSpectrumComputing/cwlexec https://github.com/common-workflow-language/common-workflow-language |
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| dbo:wikiPageLength | 6772 (xsd:nonNegativeInteger) |
| dbo:wikiPageRevisionID | 1107084465 (xsd:integer) |
| dbo:wikiPageWikiLink | dbr:Pegasus_(workflow_management) dbr:Open_Bioinformatics_Foundation dbr:Galaxy_(computational_biology) dbr:Apache_Airflow dbr:Apache_License dbc:Cloud_standards dbc:Workflow_languages dbc:Computer_standards dbc:Data_interchange_standards dbr:BioCompute_Object dbr:Platform_LSF dbr:Software_Freedom_Conservancy dbr:Michigan_State_University |
| dbp:abbreviation | CWL (en) |
| dbp:caption | CWL Logo (en) |
| dbp:license | dbr:Apache_License |
| dbp:longName | The Common Workflow Language standards (en) |
| dbp:relatedStandards | dbr:BioCompute_Object |
| dbp:status | Published (en) |
| dbp:title | Common Workflow Language (en) |
| dbp:version | 1.200000 (xsd:double) |
| dbp:versionDate | 2020-08-07 (xsd:date) |
| dbp:wikiPageUsesTemplate | dbt:Infobox_technology_standard dbt:Primary_sources dbt:Start_date dbt:URL |
| dbp:yearStarted | 2014-07-10 (xsd:date) |
| dct:subject | dbc:Cloud_standards dbc:Workflow_languages dbc:Computer_standards dbc:Data_interchange_standards |
| rdfs:comment | El Common Workflow Language (CWL) és un estàndard per descriure fluxos de treball computacionals d'anàlisis de dades. El desenvolupament del CWL està enfocat sobretot per a usos intensius de dades, com el que es donen a la bioinformàtica, amb imatges mèdiques, a l'astronomia, a la física o a la química. Un dels objectius clau del CWL és que el flux de treball pugui ser portable i, per tant, reproduïble en entorns computacionals diferents. (ca) The Common Workflow Language (CWL) is a standard for describing computational data-analysis workflows. Development of CWL is focused particularly on serving the data-intensive sciences, such as Bioinformatics, Medical Imaging, Astronomy, Physics, and Chemistry. A key goal of the CWL is to allow the creation of a workflow that is portable and thus may be run reproducibly in different computational environments. (en) |
| rdfs:label | Common Workflow Language (en) Common Workflow Language (ca) |
| owl:sameAs | wikidata:Common Workflow Language dbpedia-ca:Common Workflow Language https://global.dbpedia.org/id/5ur7h |
| prov:wasDerivedFrom | wikipedia-en:Common_Workflow_Language?oldid=1107084465&ns=0 |
| foaf:depiction | wiki-commons:Special:FilePath/CWL-Logo-4k.png |
| foaf:isPrimaryTopicOf | wikipedia-en:Common_Workflow_Language |
| is dbo:wikiPageDisambiguates of | dbr:CWL |
| is dbo:wikiPageWikiLink of | dbr:BioCompute_Object dbr:CWL dbr:Scientific_workflow_system |
| is dbp:relatedStandards of | dbr:BioCompute_Object |
| is foaf:primaryTopic of | wikipedia-en:Common_Workflow_Language |
