OsmY RNA motif (original) (raw)

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dbo:abstract The osmY RNA motif is a conserved RNA structure that was discovered by bioinformatics.osmY motif RNAs are found in Enterobacteriaceae organisms, although it is not predicted to reside in Escherichia coli. All known osmY RNAs occur upstream of osmY genes, which encode proteins that are either secreted out of the cell, or are present in the periplasm in some organisms. The osmY RNA motif exhibits little conserved sequence in comparison to many known RNAs, although its secondary structure is well conserved. It is generally located nearby to the Shine-Dalgarno sequence of the downstream gene. Presumably, the RNAs function as cis-regulatory elements, however the poor sequence conservation makes it difficult to determine if there are more diverged homologous sequences that might occur in different genetic locations. (en)
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dbo:wikiPageWikiLink dbr:Enterobacteriaceae dbr:Nucleic_acid_secondary_structure dbr:Gene dbc:Non-coding_RNA dbr:Escherichia_coli dbr:Protein dbr:RNA dbr:Bioinformatics_discovery_of_non-coding_RNAs dbr:Homology_(biology) dbr:Cis-regulatory_element dbr:Sequence_conservation dbr:Small_RNA dbr:Secretion dbr:Periplasm dbr:Secondary_structure dbr:Shine-Dalgarno
dbp:caption Consensus secondary structure and sequence conservation of osmY RNA (en)
dbp:name osmY (en)
dbp:rfam RF03036 (en)
dbp:rnaType dbr:Gene dbr:Small_RNA
dbp:symbol osmY (en)
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dct:subject dbc:Non-coding_RNA
rdfs:comment The osmY RNA motif is a conserved RNA structure that was discovered by bioinformatics.osmY motif RNAs are found in Enterobacteriaceae organisms, although it is not predicted to reside in Escherichia coli. (en)
rdfs:label OsmY RNA motif (en)
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