| dbo:abstract |
The ratio average (RA) plot is an integer-based version of an MA plot for visualizing two-condition count data. Its distinctive arrow-like shape derives from the way it includes condition-unique (0,n) or (n,0) points into the plot via an epsilon factor. (en) |
| dbo:thumbnail |
wiki-commons:Special:FilePath/MaPlot-edgeR.smear-wikipedia.png?width=300 |
| dbo:wikiPageExternalLink |
https://cran.r-project.org/web/packages/caroline/index.html http://www.bioconductor.org/packages/release/bioc/html/edgeR.html http://bioconductor.org/packages/devel/bioc/html/manta.html http://en.wiktionary.org/wiki/overplotting https://web.archive.org/web/20110825045150/http:/projetos.inpa.gov.br/i3geo/pacotes/r/win/library/graphics/html/rug.html |
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31446938 (xsd:integer) |
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5722 (xsd:nonNegativeInteger) |
| dbo:wikiPageRevisionID |
943081011 (xsd:integer) |
| dbo:wikiPageWikiLink |
dbr:MA_plot dbr:DNA_microarray dbr:Vector_(geometric) dbr:Epsilon dbr:Line_(geometry) dbc:Gene_expression dbr:Jitter dbc:Microarrays dbr:Bland–Altman_plot dbc:Plots_(graphics) |
| dbp:align |
center (en) |
| dbp:alt |
A jittered RA plot (en) An RA plot (en) MA plot with uniques as a "smear" (en) RA plot with the condition-unique points added (en) |
| dbp:caption |
RA plot with condition-unique and zero points as diagonal "arms" giving it a distinct ray-like shape (en) MA plot with condition-unique and zero points as a "smear" (en) An RA plot: many points have identical coordinates and are hidden from each other (en) A jittered RA plot: contiguous patches have identical original coordinates (en) |
| dbp:footer |
RA plot in the caroline package (en) Two different ways of artificially adding condition-unique points into an MA-style plot. (en) |
| dbp:image |
MaPlot-edgeR.smear-wikipedia.png (en) RaPlot-nouniques-wikipedia.png (en) RaPlot-nouniques.jittered-wikipedia.png (en) RaPlot-orange.uniques-wikipedia.png (en) |
| dbp:width |
300 (xsd:integer) |
| dbp:wikiPageUsesTemplate |
dbt:Clear dbt:Multiple_image |
| dct:subject |
dbc:Gene_expression dbc:Microarrays dbc:Plots_(graphics) |
| gold:hypernym |
dbr:Integer |
| rdfs:comment |
The ratio average (RA) plot is an integer-based version of an MA plot for visualizing two-condition count data. Its distinctive arrow-like shape derives from the way it includes condition-unique (0,n) or (n,0) points into the plot via an epsilon factor. (en) |
| rdfs:label |
RA plot (en) |
| owl:sameAs |
freebase:RA plot wikidata:RA plot https://global.dbpedia.org/id/4u2gA |
| prov:wasDerivedFrom |
wikipedia-en:RA_plot?oldid=943081011&ns=0 |
| foaf:depiction |
wiki-commons:Special:FilePath/MaPlot-edgeR.smear-wikipedia.png wiki-commons:Special:FilePath/RaPlot-nouniques-wikipedia.png wiki-commons:Special:FilePath/RaPlot-nouniques.jittered-wikipedia.png wiki-commons:Special:FilePath/RaPlot-orange.uniques-wikipedia.png |
| foaf:isPrimaryTopicOf |
wikipedia-en:RA_plot |
| is dbo:wikiPageWikiLink of |
dbr:MA_plot dbr:Binary_logarithm |
| is foaf:primaryTopic of |
wikipedia-en:RA_plot |
