taveRNA is a software suite for RNA/DNA secondary structure. It is developed in the laboratories for computational biology of the School of Computing Science at the Simon Fraser University. The suite is composed by alteRNA, for RNA density fold computing, inteRNA, for RNA-RNA interaction prediction, piRNA, for predicting the joint partition function, equilibrium concentration, ensemble energy, and melting temperature for two RNA sequences, pRuNA, a sequence based pruning RNA interaction search engine, and smyRNA, a platform independent C program novel ab initio ncRNA finder.
| Property |
Value |
| dbo:abstract |
taveRNA is a software suite for RNA/DNA secondary structure. It is developed in the laboratories for computational biology of the School of Computing Science at the Simon Fraser University. The suite is composed by alteRNA, for RNA density fold computing, inteRNA, for RNA-RNA interaction prediction, piRNA, for predicting the joint partition function, equilibrium concentration, ensemble energy, and melting temperature for two RNA sequences, pRuNA, a sequence based pruning RNA interaction search engine, and smyRNA, a platform independent C program novel ab initio ncRNA finder. taveRNA is not related to the bioinformatics workflow system Apache Taverna. (en) |
| dbo:developer |
dbr:Simon_Fraser_University |
| dbo:wikiPageExternalLink |
http://compbio.cs.sfu.ca/taverna http://compbio.cs.sfu.ca/taverna%7Clink |
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| dbo:wikiPageWikiLink |
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| dbp:developer |
dbr:Simon_Fraser_University |
| dbp:name |
taveRNA (en) |
| dbp:website |
http://compbio.cs.sfu.ca/taverna%7Clink |
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dbt:Infobox_software dbt:Refbegin dbt:Refend dbt:Reflist dbt:Genetics-stub dbt:Science-software-stub |
| dcterms:subject |
dbc:Bioinformatics_software dbc:Simon_Fraser_University |
| gold:hypernym |
dbr:Suite |
| rdf:type |
owl:Thing dbo:Software schema:CreativeWork dbo:Work wikidata:Q386724 wikidata:Q7397 yago:Abstraction100002137 yago:Code106355894 yago:CodingSystem106353757 yago:Communication100033020 yago:Writing106359877 yago:WrittenCommunication106349220 yago:Software106566077 |
| rdfs:comment |
taveRNA is a software suite for RNA/DNA secondary structure. It is developed in the laboratories for computational biology of the School of Computing Science at the Simon Fraser University. The suite is composed by alteRNA, for RNA density fold computing, inteRNA, for RNA-RNA interaction prediction, piRNA, for predicting the joint partition function, equilibrium concentration, ensemble energy, and melting temperature for two RNA sequences, pRuNA, a sequence based pruning RNA interaction search engine, and smyRNA, a platform independent C program novel ab initio ncRNA finder. (en) |
| rdfs:label |
TaveRNA (en) |
| owl:sameAs |
freebase:TaveRNA wikidata:TaveRNA https://global.dbpedia.org/id/4vtYw |
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wikipedia-en:TaveRNA?oldid=1022074895&ns=0 |
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http://compbio.cs.sfu.ca/taverna%7Clink |
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wikipedia-en:TaveRNA |
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taveRNA (en) |
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dbr:Taverna_(disambiguation) |
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dbr:Partition_function_for_Interacting_RNAs dbr:BioSLAX dbr:Taverna_(disambiguation) |
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