GigaDB Dataset - DOI 10.5524/100068 (original) (raw)
EMPeror is an interactive next generation tool for the analysis, visualization and understanding of high throughput microbial ecology datasets.
Due to it’s tailor-made graphical user interface, delving into a new dataset to elucidate the patterns hidden in the data, has never been easier. EMPeror brings a rich set of customizations and modifications that can be integrated into any QIIME compliant dataset; with lightweight data files and hardware accelerated graphics, constitutes itself as the state of the art for analyzing N-dimensional data using principal coordinates analysis.
The data presented here is the version of the software at point of publication, together with the example results used to illiustrate the functionality in the associated GigaScience paper. In addition, we host the script used to generate the EMPeror input file to create these examples, which some users may find useful to help replicate the example.
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File Name | Description | Sample ID | Data Type | File Format | Size | Release Date | File Attributes | Download |
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README.txt | Readme | TEXT | 838 B | 2013-11-13 | MD5 checksum: 439f51cab8f97747f4c33c7c2f0f309a | |||
map-txt.tsv | Metadata mapping file | Tabular data | TSV | 33.76 MB | 2013-11-13 | MD5 checksum: 6ed3e383c2bcf2f44e0795b61848fa3d | ||
pcoa_unweighted_unifrac_otu_table_even500.nov35.txt | Principal coordinates file. | Tabular data | TEXT | 583.63 MB | 2013-11-13 | MD5 checksum: 009c2a6e864180a0fbdd6d70936cfb48 | ||
index.html | Example EMPeror visualization file. To load directly from GigaDB simply click file name. Enter both username and password as 'gigadb'. This will take alot longer to open than if you download the 'emperor_unweighted_unifrac.zip' file, unzip and open the index.html file on your local machine. | HTML | UNKNOWN | 24.90 MB | 2013-11-13 | MD5 checksum: 14054547997d3ad550b3cdf910a7713c | ||
emperor_unweighted_unifrac.zip | This ZIP archive contains all the files required to display the EMPeror visualisation example file. Download, unzip and open the "index.html" file using chrome or another web-browser. | Mixed archive | zip | 2.49 MB | 2013-11-13 | |||
full-map.tsv | metadata mapping file | Tabular data | UNKNOWN | 33.76 MB | 2013-11-13 | MD5 checksum: 44e39e9c17de9104b8a1d07e2991330c |
Date | Action |
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November 27, 2015 | File emperor_unweighted_unifrac.zip updated |