- CASOS Automap
- CASOS ORA
- cFinder
- Clair Library
- Cytoscape
- DataMob
- FANMOD: Fast Network Motif Detection
- Fast Modularity
- GraphViz
- GUESS
- iGraph
- InfoVis Cyberinfrastructure
- INSNA's List of SNA Packages
- JUNG: Java Universal Network/Graph Framework
- LDA: Latent Dirichlet Allocation
- Mallet
- Matlab Graph Package
- Neo4j
- NetDraw
- NetKit-SRL
- NetLogo
- Network Workbench
- NetworkX
- NodeXL
- Octave
- Pajek
- R
- R's SNA Package
- Research Quality Data Sets
- Sci2
- SIENA: Simulation Investigation for Empirical Network Analysis
- SNAP: Stanford Network Analysis Platform
- SoNIA: Social Network Image Animator
- Statnet
- TouchGraph
- UCInet
- WEKA
- Wordij
- yEd