Caffeine dehydrogenase (original) (raw)

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Enzyme

Caffeine dehydrogenase Image of the beta subunit in caffeine dehydrogenase Image of the gamma subunit in caffeine dehydrogenase
Identifiers
EC no. 1.17.5.2
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
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Caffeine dehydrogenase, commonly referred to in scientific literature as caffeine oxidase (EC 1.17.5.2), is an enzyme with the systematic name caffeine:ubiquinone oxidoreductase.[1] The enzyme is most well known for its ability to directly oxidize caffeine, a type of methylxanthine, to trimethyluric acid.[2] Caffeine dehydrogenase can be found in bacterium Pseudomonas sp. CBB1 and in several species within the genera Alcaligenes, Rhodococcus, and Klebsiella.

Caffeine dehydrogenase found in Pseudomonas sp. CBB1 is a heterotrimer with a αβγ structure and is encoded by the gene cdhA.[1] The alpha subunit is the largest of the three, and the gamma subunit is the smallest. The molecular weights of the alpha, beta, and gamma subunits are 90.0 kD, 40.0 kD, and 20.0 kD respectively. However, caffeine dehydrogenase has also been found as a monomeric structure in Alcaligenes sp. strain CF8 (65 kDa) and a Rhodococcus sp.-Klebsiella sp. mixed-culture consortium.[1] The heterotrimer is noted as being similar to the xanthine dehydrogenase found in Veillonella atypica.[1][3]

In comparison to _N_-demethylases, another class of caffeine-degrading enzymes, caffeine dehydrogenase does not require the use of oxygen, NAD, or NADP as electron acceptors.[4] Instead, caffeine dehydrogenase uses dichlorophenol, indophenol, coenzyme Q0, and cytochrome c as electron acceptors.[1][4] Caffeine dehydrogenase has been noted as being more stable as well.[4]

Caffeine dehydrogenase is responsible for catalyzing the oxidation of caffeine directly into trimethyluric acid, and the enzyme uses coenzyme Q0, also known as ubiquinone, as an electron acceptor. This is done by incorporating an oxygen atom from a water molecule into the C-8 position, and the overall reaction can be seen in the following chemical reaction:

caffeine + ubiquinone (Q0 ox) + H2O ⇌ {\displaystyle \rightleftharpoons } {\displaystyle \rightleftharpoons } 1,3,7-trimethyluric acid + ubiquinol (Q0 red)

The enzyme is specific for caffeine, less active on theobromine, and has no activity on xanthine.[5] The product is stoichiometrically produced from caffeine at a 1:1 molar ratio, and there was no hydrogen peroxide byproduct.[1] Enzyme activity is optimal at pH 7.0 in 50 mM potassium phosphate buffer, and activity increased linearly from 298 K to 339 K.[1]

Biological function

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Trimethyluric acid can enter the purine catabolic pathway and further break down into other useful compounds.[4] Trimethyluric acid has been reported to break down further into 3, 6, 8-trimethylallantoin by resting cells in a Rhodococcus and Klebsiella mixed culture.[6]

Industrial significance

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Caffeine (1,3,7-trimethylxanthine), the substrate in the above reaction, is a purine alkaloid found in a variety of plant species, such as coffee, cacao, cola, and tea leaves.[7] Caffeine has also been used as a cardiac, neurological, and respiratory stimulant. Because of its prevalence in the modern world in the form of beverages, food, and medicine, caffeine has become one of the world's major agro-industrial wastes.[2] Thus, caffeine has become more noticeable in surface water, groundwater, and waste water effluents all over the world.[8] In addition to being an addictive substance, it has also been shown to lead to adverse health effects, such as irregular sleeping patterns, increase in blood pressure, palpitations, and anxiety.[9]

Decaffeination has been traditionally recommended to reduce caffeine content in food and beverages, but to perform decaffeination by physio-chemical treatments is expensive and can produce other waste that may require further treatment.[2] Thus, microbial bioprocessing has begun to appear more attractive, with bacteria that are capable of metabolizing caffeine being considered. Specifically, bacteria containing caffeine dehydrogenase have been seen as helpful in treating caffeine in agro-industrial wastes of coffee pulps and husks,[10] which can then be used to feed farm animals. In addition, the caffeine dehydrogenase found in Alcaligenes species CF8 may be useful in waste treatment and biosensor development.[2]

Caffeine dehydrogenase, when in the presence of a tetrazolium dye, has been shown to be suitable for detecting caffeine in coffee, soda, and milk due to its high specificity for caffeine.[9] Thus, been used to estimate caffeine levels in pharmaceuticals.[9] However, it has been noted that caffeine dehydrogenase would not be useful in the recovery of methylxanthine intermediates that hold pharmaceutical value since the reaction is only a single step.[4]

  1. ^ a b c d e f g Yu CL, Kale Y, Gopishetty S, Louie TM, Subramanian M (January 2008). "A novel caffeine dehydrogenase in Pseudomonas sp. strain CBB1 oxidizes caffeine to trimethyluric acid". Journal of Bacteriology. 190 (2): 772–6. doi:10.1128/jb.01390-07. PMC 2223706. PMID 17981969.
  2. ^ a b c d Mohapatra BR, Harris N, Nordin R, Mazumder A (September 2006). "Purification and characterization of a novel caffeine oxidase from Alcaligenes species". Journal of Biotechnology. 125 (3): 319–27. doi:10.1016/j.jbiotec.2006.03.018. PMID 16647778.
  3. ^ Gremer L, Meyer O (June 1996). "Characterization of xanthine dehydrogenase from the anaerobic bacterium Veillonella atypica and identification of a molybdopterin-cytosine-dinucleotide-containing molybdenum cofactor". European Journal of Biochemistry. 238 (3): 862–6. doi:10.1111/j.1432-1033.1996.0862w.x. PMID 8706691.
  4. ^ a b c d e Dash SS, Gummadi SN (December 2006). "Catabolic pathways and biotechnological applications of microbial caffeine degradation". Biotechnology Letters. 28 (24): 1993–2002. doi:10.1007/s10529-006-9196-2. PMID 17009088. S2CID 24096323.
  5. ^ Mohanty SK, Yu CL, Das S, Louie TM, Gakhar L, Subramanian M (August 2012). "Delineation of the caffeine C-8 oxidation pathway in Pseudomonas sp. strain CBB1 via characterization of a new trimethyluric acid monooxygenase and genes involved in trimethyluric acid metabolism". Journal of Bacteriology. 194 (15): 3872–82. doi:10.1128/JB.00597-12. PMC 3416557. PMID 22609920.
  6. ^ Madyastha KM, Sridhar GR (August 1998). "A novel pathway for the metabolism of caffeine by a mixed culture consortium". Biochemical and Biophysical Research Communications. 249 (1): 178–81. doi:10.1006/bbrc.1998.9102. PMID 9705852.
  7. ^ Steffen, D. G. (2000-01-15). "Chemistry and Health Benefits of Caffeinated Beverages: Symposium Overview". In Parliament, Thomas H.; Ho, Chi-Tang; Schieberle, Peter (eds.). Caffeinated Beverages. ACS Symposium Series. Vol. 754. American Chemical Society. pp. 2–8. doi:10.1021/bk-2000-0754.ch001. ISBN 9780841236547.
  8. ^ Buerge II, Poiger T, Müller MD, Buser HR (February 2003). "Caffeine, an anthropogenic marker for wastewater comtamination of surface waters". Environmental Science & Technology. 37 (4): 691–700. Bibcode:2003EnST...37..691B. doi:10.1021/es020125z. PMID 12636266.
  9. ^ a b c Mohanty SK, Yu CL, Gopishetty S, Subramanian M (August 2014). "Validation of caffeine dehydrogenase from Pseudomonas sp. strain CBB1 as a suitable enzyme for a rapid caffeine detection and potential diagnostic test". Journal of Agricultural and Food Chemistry. 62 (31): 7939–46. doi:10.1021/jf501598c. PMID 25019418.
  10. ^ Mazzafera P (December 2002). "Degradation of caffeine by microorganisms and potential use of decaffeinated coffee husk and pulp in animal feeding". Scientia Agricola. 59 (4): 815–821. doi:10.1590/s0103-90162002000400030.