Magnesium in PDB 6m5g: F-Actin-Utrophin Complex (original) (raw)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the F-Actin-Utrophin Complex (pdb code 6m5g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the F-Actin-Utrophin Complex, PDB code: 6m5g:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in 6m5g

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Magnesium binding site 1 out of 5 in the F-Actin-Utrophin Complex

Mono view

Stereo pair view

| | A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F-Actin-Utrophin Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:42.0 occ:1.00 O1B A:ADP402 2.0 46.9 1.0 PB A:ADP402 3.3 46.9 1.0 O1A A:ADP402 3.5 46.9 1.0 O3B A:ADP402 3.8 46.9 1.0 NE2 A:GLN137 3.8 48.9 1.0 O3A A:ADP402 4.0 46.9 1.0 OE1 A:GLN137 4.2 48.9 1.0 CD A:GLN137 4.3 48.9 1.0 OD1 A:ASP154 4.3 44.2 1.0 PA A:ADP402 4.3 46.9 1.0 CA A:GLY301 4.4 45.1 1.0 O2B A:ADP402 4.5 46.9 1.0 OD2 A:ASP154 4.5 44.2 1.0 OD2 A:ASP11 4.6 54.6 1.0 NZ A:LYS18 4.7 51.2 1.0 CG A:ASP154 4.8 44.2 1.0 CG2 A:VAL339 4.8 50.0 1.0 | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |

Magnesium binding site 2 out of 5 in 6m5g

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Magnesium binding site 2 out of 5 in the F-Actin-Utrophin Complex

Mono view

Stereo pair view

| | A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F-Actin-Utrophin Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:40.8 occ:1.00 O1B B:ADP402 2.6 49.6 1.0 O1A B:ADP402 2.9 49.6 1.0 O2B B:ADP402 3.6 49.6 1.0 PB B:ADP402 3.6 49.6 1.0 CA B:GLY301 3.9 41.5 1.0 OD2 B:ASP154 4.0 41.9 1.0 PA B:ADP402 4.1 49.6 1.0 NE2 B:GLN137 4.2 46.2 1.0 O3A B:ADP402 4.3 49.6 1.0 OD2 B:ASP11 4.4 53.3 1.0 N B:GLY302 4.5 42.8 1.0 CG2 B:VAL339 4.6 47.3 1.0 CD B:GLN137 4.7 46.2 1.0 O B:SER155 4.7 41.6 1.0 NZ B:LYS18 4.7 50.3 1.0 O2A B:ADP402 4.8 49.6 1.0 C B:GLY301 4.8 41.5 1.0 N B:GLY301 4.8 41.5 1.0 OE1 B:GLN137 4.9 46.2 1.0 O B:LYS336 4.9 49.3 1.0 O3B B:ADP402 5.0 49.6 1.0 | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |

Magnesium binding site 3 out of 5 in 6m5g

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Magnesium binding site 3 out of 5 in the F-Actin-Utrophin Complex

Mono view

Stereo pair view

| | A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F-Actin-Utrophin Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg401 b:44.9 occ:1.00 O1B C:ADP402 2.5 57.1 1.0 O1A C:ADP402 3.1 57.1 1.0 OD2 C:ASP154 3.5 42.8 1.0 OD1 C:ASP154 3.7 42.8 1.0 CA C:GLY301 3.7 44.5 1.0 PB C:ADP402 3.9 57.1 1.0 CG C:ASP154 4.0 42.8 1.0 PA C:ADP402 4.2 57.1 1.0 O3A C:ADP402 4.3 57.1 1.0 CG2 C:VAL339 4.4 49.1 1.0 N C:GLY301 4.5 44.5 1.0 NE2 C:GLN137 4.5 46.8 1.0 O2B C:ADP402 4.5 57.1 1.0 N C:GLY302 4.7 45.4 1.0 OD2 C:ASP11 4.7 53.5 1.0 C C:GLY301 4.8 44.5 1.0 O2A C:ADP402 4.8 57.1 1.0 N C:GLY156 4.9 44.8 1.0 | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |

Magnesium binding site 4 out of 5 in 6m5g

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Magnesium binding site 4 out of 5 in the F-Actin-Utrophin Complex

Mono view

Stereo pair view

| | A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F-Actin-Utrophin Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg401 b:43.6 occ:1.00 O1B D:ADP402 2.6 46.5 1.0 OD2 D:ASP154 3.7 43.0 1.0 CA D:GLY301 3.7 44.4 1.0 O1A D:ADP402 3.7 46.5 1.0 OD1 D:ASP154 3.9 43.0 1.0 PB D:ADP402 3.9 46.5 1.0 CG2 D:VAL339 4.1 49.6 1.0 CG D:ASP154 4.2 43.0 1.0 O3A D:ADP402 4.3 46.5 1.0 O2B D:ADP402 4.4 46.5 1.0 N D:GLY301 4.4 44.4 1.0 OE1 D:GLN137 4.5 47.2 1.0 OG D:SER300 4.6 45.0 1.0 CB D:VAL339 4.6 49.6 1.0 PA D:ADP402 4.7 46.5 1.0 N D:GLY156 4.8 45.6 1.0 N D:GLY302 4.8 46.3 1.0 C D:GLY301 4.8 44.4 1.0 | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |

Magnesium binding site 5 out of 5 in 6m5g

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Magnesium binding site 5 out of 5 in the F-Actin-Utrophin Complex

Mono view

Stereo pair view

| | A full contact list of Magnesium with other atoms in the Mg binding site number 5 of F-Actin-Utrophin Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg401 b:49.6 occ:1.00 O1B E:ADP402 2.0 62.1 1.0 PB E:ADP402 3.3 62.1 1.0 OD2 E:ASP154 3.7 50.6 1.0 O1A E:ADP402 3.7 62.1 1.0 O3A E:ADP402 3.7 62.1 1.0 O2B E:ADP402 4.0 62.1 1.0 OE1 E:GLN137 4.0 53.9 1.0 CA E:GLY301 4.0 51.5 1.0 CG2 E:VAL339 4.2 58.9 1.0 PA E:ADP402 4.4 62.1 1.0 O3B E:ADP402 4.5 62.1 1.0 OD2 E:ASP11 4.5 69.9 1.0 CG E:ASP154 4.5 50.6 1.0 OD1 E:ASP154 4.6 50.6 1.0 N E:GLY302 4.8 54.2 1.0 N E:GLY301 4.8 51.5 1.0 CB E:VAL339 4.8 58.9 1.0 N E:GLY156 4.9 55.9 1.0 C E:GLY301 5.0 51.5 1.0 | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |

Reference:

A.Kumari, V.K.Ragunath, M.Sirajuddin. Structural Insights Into Filament Recognition By Cellular Actin Markers To Be Published.

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