Mitochondrial Genome Database of Fish (original) (raw)

MitoFish Top

Update in 2022! MitoFish has a new user interface, allows search by synonyms and common names, and is equipped with updated MitoAnnotator and MiFish Pipeline.

MitoFish is a comprehensive and standardized fish mitochondrial genome database.

This database is for many types of people including those who...

• are interested in any fishspecies/taxonomy
• have fish mitochondrial sequence and want to BLAST it
• sequenced fish mitogenomes and want toannotate them as easily as possible
• aim at comparative mitogenomics bydownloading standardized fish mitogenome data
• analyze fish environmental DNA amplified by MiFish primers

MitoAnnotator now accepts a multi-fasta file and new MiFish Pipeline is available for analyzing fish eDNA data.

To take a glance, please visit a sample page (Anguilla japonica).

References:
Zhu et al., Mol. Biol. Evol. 40, msad035 (2023)
Sato et al., Mol. Biol. Evol. 35, 1553-1555 (2018)
Iwasaki et al., Mol. Biol. Evol. 30, 2531-2540 (2013)

Species Search

Sequence Similarity Search (BLAST)

Site Navigation:

• Top
• Species / Taxonomy
  • Simple Search
  • Advanced Search
  • High-Level Classification
  • All Species
  • Help
• Sequence Search
  • Simple Search
  • Advanced Search
  • Help
• MitoAnnotator
  • Annotate Mitogenome
• Batch Download
  • Download Mitogenomes
• MiFishPipeline
  • Analyze Fish eDNA Data
  • Stand-alone Version
  • Help
• About MitoFish
  • Overview
  • References
  • Supplemental Data
  • Change Log
  • Links
  • Statistics

MitoFish Information:

Version:

Update:

Complete mtDNA Data:

species

Complete + Partial Data:

sequences
species