Installation (original) (raw)
For the impatient
The latest source code can be downloaded from github using:
git clone --recurse-submodules https://github.com/samtools/htslib.git git clone https://github.com/samtools/bcftools.git cd bcftools
The following is optional:
autoheader && autoconf && ./configure --enable-libgsl --enable-perl-filters
make
| Important | In order to use the BCFtools plugins, this environment variable must be set and point to the correct location: export BCFTOOLS_PLUGINS=/path/to/bcftools/plugins |
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