Galaxy Screencasts and Demos (original) (raw)

Screencasts are one of several ways to learn how to use Galaxy. These video tutorials cover many aspects of Galaxy, from simple tasks like uploading data, to complex analysis.

Browse the screencasts at http://vimeo.com/galaxyproject.

Getting Started

Using Galaxy

Accounts on Main registration, openIDs Datasets 1 and Datasets 2 (pending) icons, functions, content, metadata, basic workflows Share or Publish histories, workflows, visualizations, pages, publication support
Get Data: Upload File browse, url, paste, ftp Learning Resources self-serve help Managing Histories saved histories, disk quotas
Using FTP step-by-step, wiki FASTQ Prep Illumina jobs, FASTQ Groomer, edit attributes, FastQC Custom Genomes format, how to load, read more on wiki...

Analysis

TAF1: Which genes' promoter regions contain these sites?
Metagenomics 1 and Metagenomics 2
Bushman Data Access and Bushman Data Analysis
SOLiD Single End and SOLiD Mate Pair
Mapping Against Custom Genome
Illumina Single Ends and Illumina Paired Ends
454 Mapping Single End
DNase I hypersensitive sites
Using PhyloTastic Tools inside Galaxy by Rutger Vos, created 2012-06-11
CPB-2012: prot1 Finding Human Coding Exons with Highest SNP Density prot2 Loading Data and Understanding Datatypes prot3 Calling Peaks for ChIP-seq Data prot5 Working with Multiple Sequence Alignments

Tutorials

Interval Operations tutorial

Also see Learn/Interval Operations.

Developers How To

Archives