Sol Genomics Network (original) (raw)
BLAST
Note: To match shorter sequences:
- Consider setting the word_size to a lower value.
- You may have to set the evalue to a higher value.
The default word_size for blastn is 11 and for protein-based blast programs it is 3. The correct default will be set automatically when changing the program.
Categories
Database db details
Program
Query Show example
| Expect (e-value) Threshold | Output Options |
|---|---|
| Word Size (default 11, use lower value for shorter sequences) | Max. hits to show |
| Substitution Matrix | Filters |
Select a BLAST database and paste a gene name or description. Eg: Solyc07g063040 or ribulose
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