Human hg19 chr19:39,327,028-39,342,979 UCSC Genome Browser v472 (original) (raw)
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| Custom Tracks | |
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Invariant hnRNP L Binding Sites
Resting CD4 hnRNP L Binding Sites
Resting CD4 hnRNP L CLIP Tags
Resting JSL1 hnRNP L Binding Sites
Resting JSL1 hnRNP L CLIP Tags
Stimulated CD4 hnRNP L Binding Sites
Stimulated CD4 hnRNP L CLIP Tags
Stimulated JSL1 hnRNP L Binding Sites
Stimulated JSL1 hnRNP L CLIP Tags
| | Mapping and Sequencing | |
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Base Position
p14 Fix Patches
p14 Alt Haplotypes
Assembly
BAC End Pairs
BU ORChID
Chromosome Band
deCODE Recomb
ENCODE Pilot
Exome Probesets
FISH Clones
Fosmid End Pairs
Gap
GC Percent
GRC Incident
GRC Map Contigs
Hg18 Diff
Hg38 Diff
Hi Seq Depth
INSDC
liftOver & ReMap
LRG Regions
Map Contigs
Mappability
Problematic Regions
Recomb Rate
RefSeq Acc
Restr Enzymes
Short Match
STS Markers
| | Genes and Gene Predictions | |
| ------------------------------------------------------------------- | ------------------------------ | |
GENCODE V45lift37
NCBI RefSeq
Genes Archive
CCDS
CRISPR Targets
Ensembl Genes
EvoFold
Exoniphy
GENCODE Versions
H-Inv 7.0
HGNC
IKMC Genes Mapped
lincRNAs
LRG Transcripts
MGC/ORFeome Genes
Old UCSC Genes
Other RefSeq
Pfam in UCSC Gene
Prediction Archive
Retroposed Genes
sno/miRNA
TransMap V5
tRNA Genes
UCSC Alt Events
UniProt
Vega Genes
Yale Pseudo60
| | Phenotype and Literature | |
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OMIM
Publications
AbSplice Scores
CADD 1.6
new CADD 1.7
new ClinGen
ClinGen CNVs
ClinVar Variants
Constraint scores
Coriell CNVs
COSMIC Regions
COVID Data
DECIPHER CNVs
DECIPHER SNVs
Development Delay
Dosage Sensitivity
GAD View
GenCC
Gene Interactions
GeneReviews
GWAS Catalog
Haploinsufficiency
HGMD public
Lens Patents
LOVD Variants
MGI Mouse QTL
Orphanet
PanelApp
Polygenic Risk Scores
Prediction Scores
REVEL Scores
RGD Human QTL
RGD Rat QTL
SNPedia
new SpliceAI
UniProt Variants
Variants in Papers
Web Sequences
| | mRNA and EST | |
| ------------------------------------------------------------------- | ---------------- | |
CGAP SAGE
Gene Bounds
H-Inv
Human ESTs
Human mRNAs
Human RNA Editing
Other ESTs
Other mRNAs
Poly(A)
PolyA-Seq
SIB Alt-Splicing
Spliced ESTs
UniGene
| | Expression | |
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GTEx Gene V8
Allen Brain
Burge RNA-seq
CSHL Small RNA-seq
ENC Exon Array
ENC ProtGeno
ENC RNA-seq
EPDnew Promoters
Affy Archive
GIS RNA PET
GNF Atlas 2
GTEx Gene
GTEx Transcript
GWIPS-viz Riboseq
Illumina WG-6
PeptideAtlas
qPCR Primers
RIKEN CAGE Loc
Sestan Brain
| | Regulation | |
| ------------------------------------------------------------------- | -------------- | |
ENCODE Regulation
CD34 DnaseI
CpG Islands
ENC Chromatin
ENC DNA Methyl
ENC DNase/FAIRE
ENC Histone
ENC RNA Binding
ENC TF Binding
FANTOM5
FSU Repli-chip
GeneHancer
Genome Segments
GTEx Combined eQTL
GTEx Tissue eQTL
JASPAR Transcription Factors
NKI Nuc Lamina
ORegAnno
Rao 2014 Hi-C
ReMap ChIP-seq
Stanf Nucleosome
SUNY SwitchGear
SwitchGear TSS
TFBS Conserved
TS miRNA Targets
UCSF Brain Methyl
UMMS Brain Hist
UW Repli-seq
VISTA Enhancers
| | Comparative Genomics | |
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Conservation
Cons 46-Way
Cons Indels MmCf
Evo Cpg
GERP
phastBias gBGC
Primate Chain/Net
Placental Chain/Net
Vertebrate Chain/Net
CHM13 alignments
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| Neandertal Assembly and Analysis | |
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5% Lowest S
Cand. Gene Flow
[No data-chr19]
H-C Coding Diffs
Neandertal Methyl
Neandertal Mito
[No data-chr19]
Neandertal Seq
S SNPs
Sel Swp Scan (S)
| | Denisova Assembly and Analysis | |
| -------------------------------------------------------------- | ---------------------------------- | |
Denisova Methyl
Denisova Seq
Denisova Variants
Mod Hum Variants
Modern Derived
| | Variation | |
| ------------------------------------------------------------------- | ------------- | |
dbSNP 155
1000G Archive
Array Probesets
dbSNP Archive
dbVar Common Struct Var
DGV Struct Var
EVS Variants
ExAC
Genome In a Bottle
Genome Variants
GIS DNA PET
gnomAD
HAIB Genotype
HapMap SNPs
HGDP Allele Freq
Platinum Genomes
| | Repeats | |
| ------------------------------------------------------------------- | ----------- | |
RepeatMasker
Interrupted Rpts
Microsatellite
NumtS Sequence
Segmental Dups
Self Chain
Simple Repeats
WM + SDust