Vega Genome Browser (original) (raw)
A repository for high-quality gene models produced by the manual annotation of vertebrate genomes.
Browse a genome
Human
Mouse 
Zebrafish [16-11-2016][Ensembl]
Rat
PigBrowse a region
Tasmanian devil [23-10-2013][Ensembl]
Chimpanzee [12-01-2012][Ensembl]
Gorilla
Wallaby
DogSearch:
for
Major histocompatibility complex (MHC) annotation
Non-reference regions
Human: 6-COX,6-QBL,6-SSTO,6-APD,6-DBB,6-MANN,6-MCF
Mouse: NOD/MrkTac,NOD/ShiLtJ
Pig: Large White
Further information on our MHC annotation.
Leucocyte receptor complex (LRC) annotation
Non-reference regions:
Human: COX_1,COX_2,PGF_1,PGF_2,DM1A,DM1B,MC1A,MC1B.
Further information on our LRC annotation.
Our Data
- High-quality manual annotation
- Human annotation incorporated into GENCODE
- Gene sets and regions of particular interest:
- Genes with mouse knockout and human LOF transcripts
- MHC and LRC regions
- Idd candidate regions of NOD mice
- Inter- and intra-species comparative genomics
- Cross-referenced to other databases
- Complements Ensembl
- Downloadable datasets
What's New in release 68
- Final Vega update (all species)
- Mouse Annotation Updated (Mouse)
- Human Annotation Updated (Human)
- Rat Annotation Updated (Rat)
- No schema update (all species)
More news...
Vega Genome Browser release 68 - Feb 2017 © EMBL-EBI EMBL-EBI
http://vega.archive.ensembl.org
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