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Cytoscape Developer Wiki

This is the primary source for software developer documentation for Cytoscape 3. If you add new pages or sections to the wiki, please include links to them below.

Core Developer Pages

• Cytoscape Core Branch Management
• Importing Git Repos in Eclipse
• Launching Cytoscape from Eclipse
• Cytoscape App Store

App Developer Pages

• Cytoscape 3.0 App Development
• Cytoscape App Ladder

The original Cytoscape wiki contains hordes of old, outdated and just-plain-wrong pages. Visit with caution and only transfer over current and useful pages.