Haplogroup M39 (original) (raw)

'mtDNA'

Haplogroup M39.

Click link to see tree diagram for this haplogroup.
Haplogroup M39 tree

The groups around the M* are mainly East Asian groups.

There are separate pages for M1, M6. M7, M8, M9, M10, M11, M12, M34 & M35.

The sequences for the M39 haplogroup are:

1. Sun A10.JS AY922262

2. Sun A17.JS AY922269

3. Sun A23.JS AY922275

4. Sun A36.JS AY922288

5. Sun A41.JS AY922293

6. Behar2008 A4.JS EF556151

7. Rao2009-7 A73.JS FJ383696 M39 22-SEP-2009

8. Rao2009-7 A74.JS FJ383697 M39 22-SEP-2009

9. Rao2009-7 A75.JS FJ383698 M39 22-SEP-2009

10. Rao2009-8 A1.JS FJ383699 M39 22-SEP-2009

11. Rao2009-8 A2.JS FJ383700 M39 22-SEP-2009

12. Rao2009-8 A3.JS FJ383701 M39 22-SEP-2009

13. Rao2009-8 A4.JS FJ383702 M39 22-SEP-2009

14. Rao2009-8 A5.JS FJ383703 M39 22-SEP-2009

15. Rao2009-8 A6.JS FJ383704 M39 22-SEP-2009

16. Rao2009-8 A7.JS FJ383705 M39 22-SEP-2009

17. Rao2009-8 A8.JS FJ383706 M39 22-SEP-2009

18. Rao2009-8 A9.JS FJ383707 M39 22-SEP-2009

19. Rao2009-8 A10.JS FJ383708 M39 22-SEP-2009

20. Rao2009-8 A11.JS FJ383709 M39 22-SEP-2009

21. Rao2009-8 A12.JS FJ383710 M39 22-SEP-2009

22. Rao2009-8 A13.JS FJ383711 M39 22-SEP-2009

23. Rao2009-8 A14.JS FJ383712 M39 22-SEP-2009

24. Rao2009-8 A15.JS FJ383713 M39 22-SEP-2009

25. Rao2009-8 A16.JS FJ383714 M39 22-SEP-2009

26. Rao2009-8 A17.JS FJ383715 M39 22-SEP-2009

The sequences has these differences from the CRS:

• for the main stem leading from H:

A73G A263G A750G A1438G A2706G A4769G C7028T A8701G A8860G T9540C A10398G T10873C G11719A C12705T C14766T G15301A A15326G C16223T

• and for the M* branch:

T489C A1811G C10400T T14783C G15043A

• and for M39

55.1T 65.1T A8679G C15938T

• and ignoring changes at 309 & 315.

the mutation list is:

1. Sun A10.JS AY922262 (1811) 55.1T T59- T60- 65.1T 65.2T G71- A153G C463T T485C A9374G C14664T

2. Sun A17.JS AY922269 55.1T T59- T60- 65.1T 65.2G G71- C182T A10188G C10619T C15589A C16270T T16325C

3. Sun A23.JS AY922275 55.1T T59- T60- 65.1T 65.2T G71-
   T152C A153G C463T T485C A9374G C14446T C15499A A16091G T16304C T16519C

4. Sun A36.JS AY922288 55.1T 55.2T A56T T59- T60- 65.1T 65.2T G71- T146C T3398C T3540A T4384C G5252A C5646T C6410T A8601G C9719T

5. Sun A41.JS AY922293 55.1T T59- T60- 65.1T 65.2T G71-
   C182T C960T A10188G C10619T G15106A G15497A C15589A C16270T T16325C A16482G

6. Behar2008 A4.JS EF556151 55.1T T59- T60- 65.1T 65.2G G71- T152C G207A C1120T T4928C G5773A A8704G A9284G C9383T G9738A G15043A A16166G T16311C T16519C

7. Rao2009-7 A73.JS FJ383696 M39 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G T195C C463T T485C G3531A T6620C G8152A A9374G

8. Rao2009-7 A74.JS FJ383697 M39a 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71-
   A153G T195C C463T T485C G3531A T6620C G8152A A9374G

9. Rao2009-7 A75.JS FJ383698 M39a 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71-
   A153G T195C C463T T485C G3531A G8152A A9374G T16271C

10. Rao2009-8 A1.JS FJ383699 M39 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G T195C C463T T485C G3531A T6620C G8152A A9374G

11 Rao2009-8 A2.JS FJ383700 M39 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G T195C C463T T485C G3531A G8152A A9374G T16271C

12 Rao2009-8 A3.JS. FJ383701 M39a 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G C463T T485C G3531A A9374G C14446T T16304C

1. Rao2009-8 A4.JS FJ383702 M39a 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G A234G T485C G5460A A13105G C15508T G16255A

2. Rao2009-8 A5.JS FJ383703 M39a 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A234G C463T T485C T3552C G4853A G8152A A9374G T16362C

3. Rao2009-8 A6.JS FJ383704 M39a 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G C463T T485C G3531A A9374G C14446T T16304C

4. Rao2009-8 A7.JS FJ383705 M39a 22-SEP-2009 (16223) 55.1T T59- T60- 65.1T 65.2G G71- G207A C1120T A4093G T4928C G5773A A8704G C10654T C16111T C16353T

5. Rao2009-8 A8.JS FJ383706 M39a 22-SEP-2009 (16223) 55.1T T59- T60- 65.1T 65.2G G71- G207A C1120T T4928C G5773A A8704G C10654T A15924G C16111T C16353T

6. Rao2009-8 A9.JS FJ383707 M39a 22-SEP-2009 (1811) 55.1T T59- T60- 65.1T 65.2T G71- A153G T485C G1888A T2392C A11172G C15508T A15924G T16172C

7. Rao2009-8 A10.JS FJ383708 M39a 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G T485C T1420C G7337A A11172G C15508T A15924G T16172C

8. Rao2009-8 A11.JS FJ383709 M39a 22-SEP-2009 (1811) 55.1T T59- T60- 65.1T 65.2T G71- A153G T485C C4380T 8289.1C 8289.2C 8289.3C 8289.4C 8289.5C 8289.6T 8289.7C 8289.8T 8289.9A A11172G C15508T A15924G T16172C

9. Rao2009-8 A12.JS FJ383710 M39 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- G207A C1120T T4928C G5773A A8704G C9383T

10. Rao2009-8 A13.JS FJ383711 M39 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- T146C A153G A234G C463T T485C A9374G

11. Rao2009-8 A14.JS FJ383712 M39 22-SEP-2009 (1811 16223) 55.1T T59- T60- 65.1T 65.2G G71- T204C G207A C1120T T4928C G5773A A8704G C10654T C16111T C16353T

12. Rao2009-8 A15.JS FJ383713 M39 22-SEP-2009 55.1T T59- T60- 65.1T 65.2T G71- A153G T485C T1420C A11172G C15508T A15924G T16172C

13. ARao2009-8 A16.JS FJ383714 M39 22-SEP-2009 (1811) 55.1T T59- T60- 65.1T 65.2G G71- G207A C1120T A1453G T4928C G5773A A8704G C8847A A10694C C11476T C16278T

14. Rao2009-8 A17.JS FJ383715 M39 22-SEP-2009 55.1T T59- T60- 65.1T 65.2G G71- T195C C198T C1120T T4928C G5773A A8704G C9383T A16166G T16311C

..........

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