Asb6 MGI Mouse Gene Detail - MGI:1919573 (original) (raw)

Summary

Symbol
Asb6
Name
ankyrin repeat and SOCS box-containing 6
Synonyms
2510004M11Rik
Feature Type
protein coding gene
IDs
MGI:1919573
NCBI Gene:72323
Alliance
Transcription Start Sites
3 TSS

Location &
Maps

Sequence Map
Chr2:30713109-30718312 bp, - strand
From NCBI annotation of GRCm39
Genome Browsers
Genetic Map
Chromosome 2, 21.74 cM
Mapping Data
2 experiments

Strain
Comparison

SNPs within 2kb
273 from dbSNP Build 142
Strain Annotations
18

Homology

Human Ortholog
ASB6, ankyrin repeat and SOCS box containing 6
Vertebrate Orthologs
3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog
ASB6, ankyrin repeat and SOCS box containing 6
Links
Chr Location
9q34.11; chr9:129634604-129642169 (-) GRCh38

MGI Vertebrate Homology
HCOP
vertebrate homology predictions:ASB6
Gene Tree

Mutations,
Alleles, and
Phenotypes

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Phenotype Summary
6 phenotype references
All Mutations and Alleles
Endonuclease-mediated
Gene trapped
Targeted
Incidental Mutations
Find Mice (IMSR)

Gene Ontology
(GO)
Classifications

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All GO Annotations
GO References

Molecular Function No experimental evidence to support Molecular Function annotation, following literature review. See J:73796. Biological Process carbohydrate derivative metabolism cell differentiation cell population proliferation cellular component organization DNA-templated transcription establishment of localization homeostatic process immune system process lipid metabolic process programmed cell death protein metabolic process response to stimulus signaling system development Cellular Component cell projection cytoplasmic vesicle cytoskeleton cytosol endoplasmic reticulum endosome extracellular region Golgi apparatus mitochondrion membraneless organelle nucleus organelle envelope organelle lumen plasma membrane protein-containing complex synapse vacuole Click cells to view annotations.

Expression

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results
Tissues
cDNA Data
Literature Summary
Other Mouse Links
Other Vertebrate Links

Sequences &
Gene Models

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All Sequences
RefSeq
UniProt
CCDS
Ensembl
NCBI Gene

Protein
Information

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UniProt
4 Sequences
Protein Ontology
PR:000004355 ankyrin repeat and SOCS box protein 6
InterPro Domains
IPR037327 Ankyrin repeat and SOCS box protein 6, SOCS box domain
IPR036770 Ankyrin repeat-containing domain superfamily
IPR036036 SOCS box-like domain superfamily

Molecular
Reagents

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All nucleic 55
Microarray probesets 4

References

Summaries
Developmental Gene Expression 1
Gene Ontology 3
Phenotypes 6
Earliest
J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest
J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42