LNCipedia (original) (raw)
A comprehensive compendium of human long non-coding RNAs
UAUUUUUAUUUUUUAAAAUCUGAUUUGGUGUUCCAU UGUGAGUGUGAGAGCGAGAACAGCGCUGGCUGGGGA GCAGAUCUGCAGAAUUGAAAUGACCUGGCACUUGUC ACAAAAGACCCAAAGUGCAUUGCUGUGGAAAUCAUAG UGUGAGUGUGAGAGCGAGAACAGCGCUGGCUGGGGAC UGUGAGUGUGAGAGCGAGAACAGCGCUGGCUGGGGA GCAGAUCUGCAGAAUUGAAAUGACCUGGCACUUGUC ACAAAAGACCCAAAGUGCAUUGCUGUGGAAAUCAUAG CAAAAGACCCAAAGUGCAUUGCUGUGGAAAUCAUAGAUU CAUUGCUGUGGAAAUCAUAGAUCAAAAGACCCAAAGUG
Data
LNCipedia is a public database for long non-coding RNA (lncRNA) sequence and annotation. The current release contains 127,802 transcripts and 56,946 genes.
Literature
Currently, LNCipedia offers 2,482 manually curated lncRNA articles.
Submit your data!
The lncRNA research community is encouraged to submit data to LNCipedia.
Submit a paper (reference) or a new lncRNA to LNCipedia by contacting us
LNCipedia database
| Full set | High-confidence set | |
|---|---|---|
| Transcripts | 127,802 | 107,039 |
| Genes | 56,946 | 49,372 |
Citing
If you use LNCipedia, please cite the following paper:
LNCipedia 5: towards a reference set of human long non-coding RNAs
Pieter-Jan Volders; Jasper Anckaert; Kenneth Verheggen; Justine Nuytens; Lennart Martens; Pieter Mestdagh and Jo Vandesompele;Nucleic Acids Research 2019
doi:10.1093/nar/gky1031 |PubMed |
Other LNCipedia papers
An update on LNCipedia: a database for annotated human lncRNA sequences
Pieter-Jan Volders; Kenneth Verheggen; Gerben Menschaert; Klaas Vandepoele; Lennart Martens; Jo Vandesompele and Pieter Mestdagh;Nucleic Acids Research 2015
doi:10.1093/nar/gku1060 |PubMed |Google Scholar citations
LNCipedia: a database for annotated human lncRNA transcript sequences and structures
Pieter-Jan Volders; Kenny Helsens; Xiaowei Wang; Bjorn Menten; Lennart Martens; Kris Gevaert; Jo Vandesompele; Pieter Mestdagh;Nucleic Acids Research 2013
doi:10.1093/nar/gks915 |PubMed |Google Scholar citations