The search for heterogeneity in insulin-dependent diabetes mellitus (IDDM): linkage studies, two-locus models, and genetic heterogeneity (original) (raw)
. 1983 Nov;35(6):1139–1155.
Abstract
One hundred families with insulin-dependent diabetes mellitus (IDDM) were analyzed for linkage with 27 genetic markers, including HLA, properdin factor B (BF), and glyoxalase 1(GLO) on chromosome 6, and Kidd blood group (Jk) on chromosome 2. The linkage analyses were performed under several different genetic models. An approximate correction for two-locus linkage analysis was developed and applied to four markers. Two different heterogeneity tests were implemented and applied to all the markers. One, the Predivided-Sample Test, utilizes various criteria thought to be relevant to genetic heterogeneity in IDDM. The other, the Admixture Test, looks for heterogeneity without specifying a prior how the sample should be divided. Results continued to support linkage of IDDM with three chromosome 6 markers: HLA, BF, and GLO. The total lod score for Kidd blood group, under the recessive model with 20% penetrance, is 1.63--down 1.2 from the 2.83 reported by us earlier. The only other marker whose lod score exceeded 1.0 under any model was pancreatic amylase (AMY2). The two-locus correction, which involved lowering the penetrance values used in the analysis, affected estimates of theta (recombination fraction) but did not markedly change the lod scores themselves. There was little evidence for heterogeneity within any of the lod scores, under either the Predivided-Sample Test or the Admixture Test.
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Anderson C. E., Hodge S. E., Rubin R., Rotter J. I., Terasaki P. I., Irvine W. J., Rimoin D. L. A search for heterogeneity in insulin dependent diabetes mellitus (IDDM): HLA and autoimmune studies in simplex, multiplex and multigenerational families. Metabolism. 1983 May;32(5):471–477. doi: 10.1016/0026-0495(83)90009-4. [DOI] [PubMed] [Google Scholar]
- Barbosa J., Rich S., Dunsworth T., Swanson J. Linkage disequilibrium between insulin-dependent diabetes and the Kidd blood group Jkb allele. J Clin Endocrinol Metab. 1982 Jul;55(1):193–195. doi: 10.1210/jcem-55-1-193. [DOI] [PubMed] [Google Scholar]
- Cahill G. F., Jr Current concepts of diabetic complications with emphasis on hereditary factors: a brief review. Prog Clin Biol Res. 1979;32:113–125. [PubMed] [Google Scholar]
- Cahill G. F., Jr, McDevitt H. O. Insulin-dependent diabetes mellitus: the initial lesion. N Engl J Med. 1981 Jun 11;304(24):1454–1465. doi: 10.1056/NEJM198106113042403. [DOI] [PubMed] [Google Scholar]
- Christy M., Green A., Christau B., Kromann H., Nerup J., Platz P., Thomsen M., Ryder L. P., Svejgaard A. Studies of the HLA system and insulin-dependent diabetes mellitus. Diabetes Care. 1979 Mar-Apr;2(2):209–214. doi: 10.2337/diacare.2.2.209. [DOI] [PubMed] [Google Scholar]
- Clerget-Darpoux F. Bias of the estimated recombination fraction and lod score due to an association between a disease gene and a marker gene. Ann Hum Genet. 1982 Oct;46(Pt 4):363–372. doi: 10.1111/j.1469-1809.1982.tb01587.x. [DOI] [PubMed] [Google Scholar]
- Clerget-Darpoux F., Bonaïti-Pellié C., Deschamps I., Hors J., Feingold N. Juvenile insulin-dependent diabetes: a possible susceptibility gene in interaction with HLA. Ann Hum Genet. 1981 May;45(Pt 2):199–206. doi: 10.1111/j.1469-1809.1981.tb00321.x. [DOI] [PubMed] [Google Scholar]
- Cook P. J., Hamerton J. L. Report of the committee on the genetic constitution of chromosome 1. Oslo Conference (1981): Sixth International Workshop on Human Gene Mapping. Cytogenet Cell Genet. 1982;32(1-4):111–120. doi: 10.1159/000131691. [DOI] [PubMed] [Google Scholar]
- Dunsworth T. S., Rich S. S., Morton N. E., Barbosa J. Heterogeneity of insulin-dependent diabetes-new evidence. Clin Genet. 1982 Apr;21(4):233–236. doi: 10.1111/j.1399-0004.1982.tb00756.x. [DOI] [PubMed] [Google Scholar]
- Dunsworth T. S., Rich S. S., Swanson J., Barbosa J. No evidence for linkage between diabetes and the Kidd marker. Diabetes. 1982 Nov;31(11):991–993. doi: 10.2337/diacare.31.11.991. [DOI] [PubMed] [Google Scholar]
- Green A., Morton N. E., Iselius L., Svejgaard A., Platz P., Ryder L. P., Hauge M. Genetic studies of insulin-dependent diabetes mellitus: segregation and linkage analyses. Tissue Antigens. 1982 Mar;19(3):213–221. doi: 10.1111/j.1399-0039.1982.tb01442.x. [DOI] [PubMed] [Google Scholar]
- Greenberg D. A. A simple method for testing two-locus models of inheritance. Am J Hum Genet. 1981 Jul;33(4):519–530. [PMC free article] [PubMed] [Google Scholar]
- Greenberg D. A., Anderson C. E. The search for heterogeneity in insulin-dependent diabetes mellitus: evidence for familial and nonfamilial forms. Am J Med Genet. 1983 Mar;14(3):487–499. doi: 10.1002/ajmg.1320140313. [DOI] [PubMed] [Google Scholar]
- Hodge S. E., Anderson C. E., Neiswanger K., Field L. L., Spence M. A., Sparkes R. S., Sparkes M. C., Crist M., Terasaki P. I., Rimoin D. L. Close genetic linkage between diabetes mellitus and kidd blood group. Lancet. 1981 Oct 24;2(8252):893–895. doi: 10.1016/s0140-6736(81)91391-x. [DOI] [PubMed] [Google Scholar]
- Hodge S. E., Rotter J. I., Lange K. L. A three-allele model for heterogeneity of juvenile onset insulin-dependent diabetes. Ann Hum Genet. 1980 May;43(4):399–409. doi: 10.1111/j.1469-1809.1980.tb01573.x. [DOI] [PubMed] [Google Scholar]
- Hodge S. E., Spence M. A. Some epistatic two-locus models of disease. II. The confounding of linkage and association. Am J Hum Genet. 1981 May;33(3):396–406. [PMC free article] [PubMed] [Google Scholar]
- Kirk R. L., Theophilus J., Whitehouse S., Court J., Zimmet P. Genetic susceptibility to diabetes mellitus: the distribution of properdin factor B (Bf) and glyoxalase (GLO) phenotypes. Diabetes. 1979 Oct;28(10):949–951. doi: 10.2337/diab.28.10.949. [DOI] [PubMed] [Google Scholar]
- Lewis M., Kaita H., Philipps S., Steinberg A. G., Giblett E. R., Anderson J. E. Analysis of linkage relationships of Co, Jk and K with each other and with chromosome 2 loci ACP1 and Km. Ann Hum Genet. 1982 Oct;46(Pt 4):349–354. doi: 10.1111/j.1469-1809.1982.tb01585.x. [DOI] [PubMed] [Google Scholar]
- Lucarelli P., Scacchi R., Corbo R. M., Palmarino R., Orsini M., Campea L., Carapella E., Pascone R. Genetic polymorphisms in juvenile-onset diabetes. Hum Hered. 1978;28(2):89–95. doi: 10.1159/000152948. [DOI] [PubMed] [Google Scholar]
- MORTON N. E. Sequential tests for the detection of linkage. Am J Hum Genet. 1955 Sep;7(3):277–318. [PMC free article] [PubMed] [Google Scholar]
- MORTON N. E. The detection and estimation of linkage between the genes for elliptocytosis and the Rh blood type. Am J Hum Genet. 1956 Jun;8(2):80–96. [PMC free article] [PubMed] [Google Scholar]
- McDevitt H. O., Bodmer W. F. HL-A, immune-response genes, and disease. Lancet. 1974 Jun 22;1(7869):1269–1275. doi: 10.1016/s0140-6736(74)90021-x. [DOI] [PubMed] [Google Scholar]
- Nakao Y., Matsumoto H., Miyazaki T., Mizuno N., Arima N., Wakisaka A., Okimoto K., Akazawa Y., Tsuji K., Fujita T. IgG heavy-chain (Gm) allotypes and immune response to insulin in insulin-requiring diabetes mellitus. N Engl J Med. 1981 Feb 12;304(7):407–409. doi: 10.1056/NEJM198102123040706. [DOI] [PubMed] [Google Scholar]
- Ott J. A simple scheme for the analysis of HLA linkages in pedigrees. Ann Hum Genet. 1978 Oct;42(2):255–257. doi: 10.1111/j.1469-1809.1978.tb00657.x. [DOI] [PubMed] [Google Scholar]
- Ott J. Counting methods (EM algorithm) in human pedigree analysis: linkage and segregation analysis. Ann Hum Genet. 1977 May;40(4):443–454. [PubMed] [Google Scholar]
- Ott J. Estimation of the recombination fraction in human pedigrees: efficient computation of the likelihood for human linkage studies. Am J Hum Genet. 1974 Sep;26(5):588–597. [PMC free article] [PubMed] [Google Scholar]
- Rao D. C., Keats B. J., Morton N. E., Yee S., Lew R. Variability of human linkage data. Am J Hum Genet. 1978 Sep;30(5):516–529. [PMC free article] [PubMed] [Google Scholar]
- Raum D., Alper C. A., Stein R., Gabbay K. H. Genetic marker for insulin-dependent diabetes mellitus. Lancet. 1979 Jun 9;1(8128):1208–1210. doi: 10.1016/s0140-6736(79)91895-6. [DOI] [PubMed] [Google Scholar]
- Raum D., Awdeh Z., Alper C. A. BF types and the mode of inheritance of insulin-dependent diabetes mellitus (IDDM). Immunogenetics. 1981;12(1-2):59–74. doi: 10.1007/BF01561651. [DOI] [PubMed] [Google Scholar]
- Risch N., Baron M. X-linkage and genetic heterogeneity in bipolar-related major affective illness: reanalysis of linkage data. Ann Hum Genet. 1982 May;46(Pt 2):153–166. doi: 10.1111/j.1469-1809.1982.tb00706.x. [DOI] [PubMed] [Google Scholar]
- Rotter J. I., Rimoin D. L. Heterogeneity in diabetes mellitus--update, 1978. Evidence for further genetic heterogeneity within juvenile-onset insulin-dependent diabetes mellitus. Diabetes. 1978 May;27(5):599–605. doi: 10.2337/diab.27.5.599. [DOI] [PubMed] [Google Scholar]
- Rotter J. I. The modes of inheritance of insulin-dependent diabetes mellitus or the genetics of IDDM, no longer a nightmare but still a headache. Am J Hum Genet. 1981 Nov;33(6):835–851. [PMC free article] [PubMed] [Google Scholar]
- Rubinstein P., Ginsberg-Fellner F., Falk C. Genetics of Type I diabetes mellitus: a single, recessive predisposition gene mapping between HLA-B and GLO. With an appendix on the estimation of selection bias. Am J Hum Genet. 1981 Nov;33(6):865–882. [PMC free article] [PubMed] [Google Scholar]
- SMITH C. A. TESTING FOR HETEROGENEITY OF RECOMBINATION FRACTION VALUES IN HUMAN GENETICS. Ann Hum Genet. 1963 Nov;27:175–182. doi: 10.1111/j.1469-1809.1963.tb00210.x. [DOI] [PubMed] [Google Scholar]
- Shows T. B., McAlpine P. J. The 1981 catalogue of assigned human genetic markers and report of the nomenclature committee. Oslo Conference (1981): Sixth International Workshop on Human Gene Mapping. Cytogenet Cell Genet. 1982;32(1-4):221–245. doi: 10.1159/000131702. [DOI] [PubMed] [Google Scholar]
- Spielman R. S., Baker L., Zmijewski C. M. Gene dosage and suceptibility to insulin-dependent diabetes. Ann Hum Genet. 1980 Oct;44(Pt 2):135–150. doi: 10.1111/j.1469-1809.1980.tb00954.x. [DOI] [PubMed] [Google Scholar]
- Thomson G. A two locus model for juvenile diabetes. Ann Hum Genet. 1980 May;43(4):383–398. doi: 10.1111/j.1469-1809.1980.tb01572.x. [DOI] [PubMed] [Google Scholar]
- Vague P., Melis C., Mercier P., Vialettes B., Lassmann V. The increased frequency of the Lewis negative blood group in a diabetic population. Diabetologia. 1978 Jul;15(1):33–36. doi: 10.1007/BF01219325. [DOI] [PubMed] [Google Scholar]
- Walsh L. J., Cox D. W., Ehrlich R. M. The HLAB*18,BF*F1 in haplotype in type 1 diabetes. Am J Med Genet. 1982 Mar;11(3):337–343. doi: 10.1002/ajmg.1320110310. [DOI] [PubMed] [Google Scholar]