NITRC: GIFTI: Tool/Resource Info (original) (raw)

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Geometry format under the Neuroimaging Informatics Technology Initiative (NIfTI).

Execution Options

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Specifications

Category:

[Other Information Resource](/search/?type%5Fof%5Fsearch=group&offset=0&s=relevancy&rows=20&term[]=cat:323:Other Information Resource "Category > Information Resource > Other Information Resource"), [Algorithm or Reusable Library](/search/?type%5Fof%5Fsearch=group&offset=0&s=relevancy&rows=20&term[]=cat:308:Algorithm or Reusable Library "Category > Software > Algorithm or Reusable Library")

Development Status:

[4 - Beta](/search/?type%5Fof%5Fsearch=group&offset=0&s=relevancy&rows=20&term[]=cat:10:4 - Beta "Development Status > 4 - Beta")

Diagnosis:

[Parkinson Disease](/search/?type%5Fof%5Fsearch=group&offset=0&s=relevancy&rows=20&term[]=cat:742:Parkinson Disease "Diagnosis > Parkinson Disease")

Domain:

[Computational Neuroscience](/search/?type%5Fof%5Fsearch=group&offset=0&s=relevancy&rows=20&term[]=cat:641:Computational Neuroscience "Domain > Computational Neuroscience"), MR

Intended Audience:

Developers, [End Users](/search/?type%5Fof%5Fsearch=group&offset=0&s=relevancy&rows=20&term[]=cat:2:End Users "Intended Audience > End Users")

Natural Language:

English

Operating System:

[OS Independent](/search/?type%5Fof%5Fsearch=group&offset=0&s=relevancy&rows=20&term[]=cat:235:OS Independent "Operating System > OS Independent")

Programming Language:

C, Python

Supported Data Format:

GIfTI

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Associations

is part of:

BrainVISA
NIfTI
FreeSurfer
NeuroDebian

works well with:

AFNI
Center for Computational Biology (CCB)
BrainVoyager
Connectome Viewer
Caret
FieldTrip
Connectome Workbench
Surf Ice
Papaya

works with:

freesurferformats: R Package For Reading and Writing Neuroimaging File Formats
fsbrain
ciftiTools: Tools for Reading, Writing, Viewing and Manipulating CIFTI Files

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Recent Activity - Documents

PubMed Mentions documentation

[Relating sex-bias in human cortical and hippocampal microstructure to sex hormones.](/docman/view.php/75/223085/Relating sex-bias in human cortical and hippocampal microstructure to sex hormones.) posted by NITRC Moderator on Sep 14

PubMed Mentions documentation

[Insights into hippocampal perfusion using high-resolution, multi-modal 7T MRI.](/docman/view.php/75/216296/Insights into hippocampal perfusion using high-resolution, multi-modal 7T MRI.) posted by NITRC Moderator on Apr 13

PubMed Mentions documentation

[Phybers: a package for brain tractography analysis.](/docman/view.php/75/216295/Phybers: a package for brain tractography analysis.) posted by NITRC Moderator on Apr 13

PubMed Mentions documentation

[Measures of resting-state brain network segregation and integration vary in relation to data quantity: implications for within and between subject comparisons of functional brain network organization.](/docman/view.php/75/214773/Measures of resting-state brain network segregation and integration vary in relation to data quantity: implications for within and between subject comparisons of functional brain network organization.) posted by NITRC Moderator on Mar 16

PubMed Mentions documentation

[Geodesic theory of long association fibers arrangement in the human fetal cortex.](/docman/view.php/75/208523/Geodesic theory of long association fibers arrangement in the human fetal cortex.) posted by NITRC Moderator on Oct 21, 2023

doc documentation

[GIFTI Surface Data Format, Version 1.0](/docman/view.php/75/747/GIFTI Surface Data Format, Version 1.0) posted by Nick Schmansky on Aug 28, 2023

PubMed Mentions documentation

[Novel insights into hippocampal perfusion using high-resolution, multi-modal 7T MRI.](/docman/view.php/75/204678/Novel insights into hippocampal perfusion using high-resolution, multi-modal 7T MRI.) posted by NITRC Moderator on Aug 19, 2023

PubMed Mentions documentation

[BIBSNet: A Deep Learning Baby Image Brain Segmentation Network for MRI Scans.](/docman/view.php/75/201780/BIBSNet: A Deep Learning Baby Image Brain Segmentation Network for MRI Scans.) posted by NITRC Moderator on May 20, 2023

PubMed Mentions documentation

[Predicting the retinotopic organization of human visual cortex from anatomy using geometric deep learning.](/docman/view.php/75/197978/Predicting the retinotopic organization of human visual cortex from anatomy using geometric deep learning.) posted by NITRC Moderator on Apr 22, 2023

PubMed Mentions documentation

[Test-retest reliability of fMRI-measured brain activity during decision making under risk.](/docman/view.php/75/197979/Test-retest reliability of fMRI-measured brain activity during decision making under risk.) posted by NITRC Moderator on Apr 22, 2023

Recent Activity - Trackers

Bugs tracker

NIFTI_INTENT_NONE is valid but used as return code in case of failure posted by Chr. Roßmanith on Nov 25, 2020

Bugs tracker

gifti_io.c:3293 compiler warning in printf posted by Richard Reynolds on Mar 4, 2010

Bugs tracker

incorrect reference to gifti.dtd posted by Richard Reynolds on Mar 4, 2010

Bugs tracker

gifti_io.c:3293 compiler warning in printf posted by Nick Schmansky on Feb 26, 2010

Bugs tracker

incorrect reference to gifti.dtd posted by Nick Schmansky on Feb 19, 2010

Bugs tracker

on Mac, need 'Byte' define posted by Richard Reynolds on Mar 20, 2009

Bugs tracker

warning: 'rv' might be used uninitialized in this function posted by Nick Schmansky on May 19, 2008

Bugs tracker

on Mac, need 'Byte' define posted by Nick Schmansky on Feb 29, 2008

Bugs tracker

gxml_write_gifti can write invalid XML GIFTI type posted by Richard Reynolds on Feb 21, 2008

Bugs tracker

gxml_write_gifti can write invalid XML GIFTI type posted by Nick Schmansky on Feb 21, 2008

Recent Activity - Forums

devel forum

RE: Writing vertex-wise probability vectors akin to FreeSurfer's GCS files posted by Richard Reynolds on Mar 15

devel forum

RE: Writing vertex-wise probability vectors akin to FreeSurfer's GCS files posted by John Harwell on Mar 14

devel forum

Writing vertex-wise probability vectors akin to FreeSurfer's GCS files posted by Oscar Esteban on Mar 14

open-discussion forum

convert gifti to nifti files with CAT12 posted by ali pauline on Mar 5, 2019

devel forum

Suggestions to aid developers posted by Chris Rorden on Jan 8, 2019

open-discussion forum

Error reading func.gii giles into MATLAB posted by Lauren Nelson on Feb 8, 2017

open-discussion forum

Error reading gifti into Matlab posted by Lauren Nelson on Feb 7, 2017

open-discussion forum

RE: freesurfer_annot_to_gifti files DataType posted by Richard Reynolds on Nov 8, 2016

open-discussion forum

RE: freesurfer_annot_to_gifti files DataType posted by Nick Schmansky on Nov 7, 2016

open-discussion forum

freesurfer_annot_to_gifti files DataType posted by John Muschelli on Nov 7, 2016

Recent Activity - News

Tool & Resource news

GIFTI Human Brain Mapping Conference Abstract posted by John Harwell on May 22, 2008

Tool & Resource news

GIFTI C API is Available posted by Richard Reynolds on Dec 31, 2007

Recent Activity - Files

BrainVoyager gifti files: GIFTI converter plugin v1.0 release

GIFTI converter v1.6 (macOS, Win64, Linux) on BV support site posted by Hester Breman on Feb 8, 2023

GIFTI File Format Description: GIFTI File Format January 14, 2011 release

GIFTI_Surface_Format.pdf posted by John Harwell on Jan 14, 2011

gifticlib: GIFTI Clibs source tree release

gifticlib-1.0.9.tgz posted by Richard Reynolds on Jun 28, 2010

gifti.dtd: gifti.dtd release

gifti.dtd posted by Christian Haselgrove on Mar 16, 2010

caret gifti files: Left and Right Examples release

caret_gifti_files.zip posted by John Harwell on Mar 9, 2010

Freesurfer gifti files: Freesurfer annotation as gifti LabelTable release

freesurfer_annot_to_gifti.tgz posted by Nick Schmansky on Mar 3, 2010

AFNI/SUMA gifti files: Dset_with_LabelTable release

afni.GIFTI.Dset_with_LabelTable.tgz posted by Ziad Saad on Feb 25, 2010

Gifti Python Bindings: 1.0.4 release

pygiftiio-1.0.4.tar.gz posted by Erik Anderson on Nov 9, 2009

caret gifti files: Image of Labels On Surface release

GiftiLabelImage.jpg posted by John Harwell on Nov 3, 2009

BrainVoyager gifti files: GIFTI converter plugin v1.0 release

gifticonverter_v10_bvqx2_linux_binary_incl_help.zip posted by Hester Breman on Jun 20, 2009

Statistics more information

Home Page

RRID: SCR_009579

Documents: 2

PubMed Mentions: 25

Forums: 169 messages in 2 forums

Mailing Lists: 2

News Items: 2

Tracker: 0 open / 0 total

Total Downloads: 37307

Registered: Nov 14, 2007

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Available using NeuroDebian.NeuroDebian Package: libgiftiio-dev

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