Electron Microscopy Data Bank (original) (raw)

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proteasome*

Filter By

Current Database

• EMDB [837]
• EMPIAR [34]

Sample type

• Complex [755]
• Protein [697]
• Ligand [406]
• RNA [66]
• Sample [63]
• DNA [44]
• Cellular component [15]
• Cell [8]

Organism

• Homo sapiens [498]
• Saccharomyces cerevisiae [107]
• Saccharomyces cerevisiae [79]
• Thermoplasma acidophilum [61]
• Mycobacterium tuberculosis [36]
• Rattus norvegicus [25]
• Mus musculus [21]
• Saccharomyces cerevisiae [16]
• Chlamydomonas reinhardtii [11]
• Synthetic construct [11]
• Alphapapillomavirus 9 [9]
• Archaeoglobus fulgidus [8]
• Saccharomyces cerevisiae [8]
• Plasmodium falciparum [8]
• Mycobacterium tuberculosis [8]
• Bos taurus [8]
• Sus scrofa [7]
• Leishmania tarentolae [4]
• Trypanosoma brucei [4]
• Vairimorpha necatrix [3]
• Gallus gallus [3]
• Legionella pneumophila [3]
• Sus scrofa [3]
• (no species) [2]
• Phage display vector ptdisp [2]
• Trichomonas vaginalis [2]
• Leishmania donovani [2]
• Trypanosoma cruzi [2]
• Plasmodium falciparum [2]
• Canis lupus [2]
• Lama glama [2]
• Hepacivirus c [1]
• Human immunodeficiency virus 1 [1]
• Saccharomyces cerevisiae [1]
• Saccharomyces cerevisiae [1]
• Chaetomium thermophilum [1]
• Spinacia oleracea [1]
• Dictyostelium discoideum [1]
• Bacteriophage sp. [1]
• Lobophyllia hemprichii [1]
• Schizosaccharomyces pombe [1]
• Escherichia coli [1]
• Plasmodium falciparum [1]
• Plasmodium falciparum [1]
• Chaetomium thermophilum [1]
• Escherichia coli [1]
• Meleagris gallopavo [1]
• Pan troglodytes [1]

EM Method

• Single-particle [803]
• Subtomogram averaging [24]
• Tomography [10]

Resolution

• < 2Å [2]
• ≥ 2Å and < 3Å [146]
• ≥ 3Å and < 4Å [426]
• ≥ 4Å and < 5Å [106]
• ≥ 5Å and < 6Å [13]
• ≥ 6Å and < 8Å [61]
• ≥ 8Å and < 12Å [31]
• ≥ 12Å and < 16Å [7]
• ≥ 16Å and < 20Å [7]
• ≥ 20Å and < 30Å [20]
• ≥ 30Å [8]

Model molecular weight

• 50-100 kDa [10]
• 100-250 kDa [110]
• 250-500 kDa [101]
• 500-1000 kDa [223]
• 1-2 MDa [140]
• 2-5 MDa [40]
• 5-10 MDa [4]

Release Date

• 2025 [50]
• 2024 [179]
• 2023 [124]
• 2022 [115]
• 2021 [121]
• 2020 [51]
• 2019 [32]
• 2018 [62]
• 2017 [50]
• 2016 [34]
• 2015 [19]
• 2014 [6]
• 2013 [15]
• 2012 [7]
• 2011 [2]
• 2010 [3]
• 2009 [1]

Author by name

• Finley D [71]
• Mao Y [68]
• Lu Y [61]
• Baumeister W [57]
• Wang Y [47]
• Beck F [46]
• Schulman BA [43]
• Xu C [41]
• Zhang S [40]
• Wu Z [39]
• Li S [37]
• Cheng Y [35]
• Ouyang Q [35]
• Chen X [32]
• Zhu Y [32]
• Zhang Z [31]
• Dong Y [30]
• Li X [30]
• Wu J [30]
• Chen S [28]
• Plitzko JM [28]
• Rubinstein JL [27]
• Rudack T [27]
• Lander GC [26]
• Wang F [25]
• Martin A [24]
• Rennella E [24]
• Turner M [24]
• Uday AB [24]
• Vahidi S [24]
• Velyvis A [24]
• Wang WL [24]
• Zeytuni N [24]
• Pfeifer G [23]
• Zhang H [23]
• Zhao J [23]
• Von Gronau S [23]
• Mann M [22]
• Prabu JR [22]
• Yu Y [22]
• Cheng J [21]
• Li H [21]
• Yin D [21]
• Yin Y [21]
• Zhao L [21]
• Zou S [21]
• Beckmann R [20]
• Hurt E [20]
• Kirschner MW [20]
• Liu L [20]
• Ma YB [20]
• Berninghausen O [19]
• Hanna J [19]
• Pan M [19]
• Rawson S [19]
• Walsh Jr Rm [19]
• Xie Y [19]
• Zhang X [19]
• Benlekbir S [18]
• Botuyan MV [18]
• Cui G [18]
• Danev R [18]
• Devost D [18]
• Guo Q [18]
• Hebert TE [18]
• Hu Q [18]
• Ji AX [18]
• Keszei AFA [18]
• Kuntz DA [18]
• Mazhab-jafari MT [18]
• Mer G [18]
• Mian MUQ [18]
• Narayanan N [18]
• Nguyen DM [18]
• Petrin D [18]
• Pomroy NC [18]
• Prive GG [18]
• Rath DH [18]
• Rizk R [18]
• Yong D [18]
• Zhai A [18]
• Zhan W [18]
• Zhao D [18]
• Ai H [17]
• Bhandari J [17]
• Lau B [17]
• Liu Q [17]
• Sakata E [17]
• Sun S [17]
• Thompson JR [17]
• Cong Y [16]
• Draczkowski P [16]
• Goodall EA [16]
• Hsu STD [16]
• Matyskiela ME [16]
• Wang YS [16]
• Yu Z [16]
• Zhang J [16]
• Zhang K [16]
• Zheng Q [16]

Author by ORCID

• Mao Y [64]
• Zhang S [37]
• Schulman BA [30]
• Cheng Y [29]
• Dong Y [28]
• Finley D [25]
• Vahidi S [24]
• Zeytuni N [24]
• Martin A [24]
• Lander GC [24]
• Turner M [24]
• Uday AB [24]
• Wu Z [22]
• Plitzko JM [22]
• Zhu Y [22]
• Zou S [21]
• Rubinstein JL [21]
• Rawson S [19]
• Walsh Jr Rm [19]
• Hanna J [19]
• Devost D [18]
• Prive GG [18]
• Mer G [18]
• Hebert TE [18]
• Nguyen DM [18]
• Mazhab-jafari MT [18]
• Rath DH [18]
• Kuntz DA [18]
• Yong D [18]
• Mian MUQ [18]
• Pomroy NC [18]
• Li H [17]
• Lau B [17]
• Sakata E [17]
• Xu C [17]
• Zhang H [16]
• Goodall EA [16]
• Hurt E [16]
• Wang YS [16]
• Hsu STD [16]
• Prabu JR [16]
• Draczkowski P [16]
• Yao X [15]
• Koren I [15]
• Zhu X [15]
• Peng C [14]
• Yin Y [14]
• Cheng J [14]
• Liu L [13]
• Hill CP [13]
• Shen PS [13]
• Du J [13]
• Caffrey B [12]
• Xie Y [12]
• Zhao M [12]
• Pan M [12]
• Chiu PL [12]
• Nagy I [12]
• Price JC [12]
• Tuttle K [12]
• Roelofs J [12]
• Chittori S [12]
• Cruz VE [11]
• Sun L [11]
• Zhang Z [11]
• Erzberger JP [11]
• Glickman MH [11]
• Moresco EMY [11]
• Beutler B [11]
• Weirich CS [11]
• Huang B [11]
• Horn-ghetko D [11]
• Wang Y [11]
• Chen Z [11]
• Fisher ON [10]
• Huang X [10]
• Sahu I [10]
• Harper JW [10]
• Lee BH [10]
• Nandi P [10]
• Adolf F [10]
• Schubert HL [10]
• Shi Y [10]
• Thoma NH [10]
• Zhu J [9]
• Cramer P [9]
• Timms RT [9]
• Watson ER [9]
• Elledge SJ [9]
• Milkereit P [9]
• H De La Pena A [9]
• Griffin PR [9]
• Li S [9]
• Griesenbeck J [9]
• Fernandez-busnadiego R [9]
• Novick S [9]
• Zhang K [9]
• Xie SC [8]
• Southworth DR [8]
• Kokic G [8]

Journal

• NAT COMMUN [135]
• PNAS [111]
• MOL CELL [85]
• NATURE [80]
• BIORXIV [76]
• NAT STRUCT MOL BIOL [76]
• TO BE PUBLISHED [53]
• SCIENCE [36]
• ELIFE [32]
• STRUCTURE [31]
• CELL [20]
• J BIOL CHEM [19]
• EMBO J [15]
• NUCLEIC ACIDS RES [14]
• SCI ADV [10]
• PLOS ONE [9]
• INT J MOL SCI [8]
• ISCIENCE [8]
• J STRUCT BIOL [8]
• NAT CHEM BIOL [8]
• CELL REP [7]
• COMMUN CHEM [6]
• CELL DISCOV [5]
• LIFE SCI ALLIANCE [5]
• NAT METHODS [5]
• BIOORG.MED.CHEM. [4]
• CELL DEATH DIFFER. [4]
• J MED CHEM [4]
• MSPHERE [4]
• NAT MICROBIOL [4]
• BIOCHEM J [3]
• CELL RES [3]
• COMMUN BIOL [3]
• PLOS PATHOG [3]
• RES COMPUT MOL BIOL [3]
• STRUCTURE (LONDON, ENGLAND : 1993) [3]
• EMBO REP [2]
• INT J BIOL MACROMOL [2]
• PLOS BIOL [2]
• PROTEIN CELL [2]
• PROTEINS [2]
• RUSS J BIOORGANIC CHEM [2]
• SCI REP [2]
• ACS CENT SCI [1]
• ACS MED.CHEM.LETT. [1]
• ADV SCI [1]
• ANAL CHEM [1]
• ANGEW CHEM INT ED ENGL [1]
• ARXIV [1]
• BIOCHEM BIOPHYS RES COMMUN [1]
• CELL CHEM BIOL [1]
• CHEM [1]
• IUCRJ [1]
• MOL CELL PROTEOMICS [1]
• MOLECULES [1]
• NAT CHEM [1]
• PLANT COMMUN [1]
• PLANT COMMUN. [1]
• PLANT COMMUNICATIONS [1]
• PNAS NEXUS [1]

Software

• RELION [272]
• CRYOSPARC [188]
• CTFFIND [32]
• PYTOM [14]
• FREALIGN [13]
• CHIMERA [11]
• CISTEM [7]
• XMIPP [7]
• EMAN [6]
• TOM TOOLBOX [5]
• IMOD [4]
• TOMO3D [4]
• EMAN2 [3]
• EMAN2 SPARX [3]
• PHENIX [3]
• EMAN2/SPARX, FREALIGN [2]
• ETOMO, TOM, PYTOM [2]
• IMAGIC, SPIDER [2]
• ML3D [2]
• PARTICLE [2]
• STOPGAP [2]
• WARP [2]
• APPION, CTFFIND3, FINDEM, RELION [1]
• CHIMERA, MDFF [1]
• COOT, PHENIX [1]
• CRYOLO [1]
• CTFFIND3 [1]
• EMAN2, RELION, CTFFIND4 [1]
• EMAN2, SPARX [1]
• ETOMO [1]
• GCTF [1]
• IMAGIC [1]
• IMAGIC, SPIDER, EMAN [1]
• IMAGIC,SPIDER,IN-HOUSE,SOFTWARE [1]
• MATLAB [1]
• SIMPLE [1]
• SPIDER, TIGRIS, IMAGIC [1]
• TIGRIS, SPIDER, IMAGIC [1]
• TIGRIS, UNBLUR, FREALIGN [1]
• UCSF CHIMERAX [1]

Microscope

• FEI TITAN KRIOS [638]
• TFS KRIOS [44]
• FEI TECNAI F20 [31]
• FEI TALOS ARCTICA [28]
• FEI TECNAI ARCTICA [27]
• FEI POLARA 300 [17]
• TFS GLACIOS [17]
• FEI TECNAI 12 [6]
• FEI TECNAI 20 [5]
• FEI TECNAI SPIRIT [5]
• OTHER [4]
• JEOL 2200FS [3]
• JEOL 2100 [2]
• JEOL 2100F [2]
• JEOL 3200FSC [2]
• JEOL CRYO ARM 200 [2]
• FEI MORGAGNI [1]
• JEOL 3200FS [1]
• TFS TALOS [1]
• TFS TUNDRA [1]

Electron Source

• FIELD EMISSION GUN [824]
• LAB6 [8]
• OTHER [5]

Film or detector model

• GATAN K2 SUMMIT (4K X 4K) [303]
• GATAN K3 (6K X 4K) [177]
• GATAN K3 BIOQUANTUM (6K X 4K) [167]
• FEI FALCON IV (4K X 4K) [44]
• FEI FALCON III (4K X 4K) [32]
• FEI FALCON II (4K X 4K) [27]
• GATAN K2 QUANTUM (4K X 4K) [24]
• TVIPS TEMCAM-F816 (8K X 8K) [13]
• GATAN K2 (4K X 4K) [12]
• GATAN ULTRASCAN 4000 (4K X 4K) [5]
• OTHER [5]
• GENERIC GATAN (4K X 4K) [4]
• DIRECT ELECTRON DE-20 (5K X 3K) [3]
• FEI EAGLE (2K X 2K) [3]
• GENERIC TVIPS (4K X 4K) [3]
• GATAN K2 BASE (4K X 4K) [2]
• GATAN MULTISCAN [2]
• KODAK SO-163 FILM [2]
• TVIPS TEMCAM-F415 (4K X 4K) [2]
• TVIPS TEMCAM-F416 (4K X 4K) [2]
• FEI CETA (4K X 4K) [1]
• FEI EAGLE (4K X 4K) [1]
• TFS FALCON 4I (4K X 4K) [1]

EMPIAR Experiment type

• EMDB [34]

EMPIAR Image category

• MICROGRAPHS - MULTIFRAME [20]
• MICROGRAPHS - SINGLE FRAME [14]
• TILT SERIES [5]
• PICKED PARTICLES - MULTIFRAME - PROCESSED [3]
• PICKED PARTICLES - SINGLE FRAME - PROCESSED [3]

External links

• UniProt [648]
• AlphaFold DB [637]
• PDBe-Kb [633]
• PDB [630]
• Pfam [592]
• Gene Ontology [588]
• ChEMBL [388]
• ChEBI [387]
• DrugBank [381]
• InterPro [348]
• Complex Portal [333]
• EMPIAR [120]
• EMDB [34]
• SCOP2 [14]
• CATH [11]

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Showing 1 - 10 of 871. Page 1 of 88

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Statistics

Cryo-EM map of the 20S proteasome in complex with the bacterial proteasome activator Bpa from M. tuberculosis

Release date: April 2, 2025
Resolution: 3.3 Å
EM Method: Single-particle

von Rosen T, Zdanowicz R, El Hadeg Y, Afanasyev P, Boehringer D, Leitner A, Glockshuber R, Weber-Ban E

Nat Commun (2025)16 pp. 3042-3042 [**DOI:** doi:10.1038/s41467-025-58073-1 Pubmed: 40155375 ]

Sample:

• Complex of the 20s proteasome with bacterial proteasome activator bpa from m. tuberculosis (Complex from Mycobacterium tuberculosis H37Rv)
• Bacterial proteasome activator (Protein from Mycobacterium tuberculosis H37Rv)
• Proteasome subunit alpha (Protein from Mycobacterium tuberculosis H37Rv)
• Proteasome subunit beta (Protein from Mycobacterium tuberculosis H37Rv)

[Show more]

20S proteasome from M. tuberculosis

Release date: April 2, 2025
Resolution: 2.5 Å
EM Method: Single-particle

von Rosen T, Zdanowicz R, El Hadeg Y, Afanasyev P, Boehringer D, Leitner A, Glockshuber R, Weber-Ban E

Nat Commun (2025)16 pp. 3042-3042 [**DOI:** doi:10.1038/s41467-025-58073-1 Pubmed: 40155375 ]

Sample:

• Proteasome subunit beta (Protein from Mycobacterium tuberculosis H37Rv)
• 20s proteasome from m. tuberculosis (Complex from Mycobacterium tuberculosis H37Rv)
• Proteasome subunit alpha (Protein from Mycobacterium tuberculosis H37Rv)

M. tuberculosis bacterial proteasome activator Bpa with bound substrate

Release date: April 2, 2025
Resolution: 4.1 Å
EM Method: Single-particle

von Rosen T, Zdanowicz R, El Hadeg Y, Afanasyev P, Boehringer D, Leitner A, Glockshuber R, Weber-Ban E

Nat Commun (2025)16 pp. 3042-3042 [**DOI:** doi:10.1038/s41467-025-58073-1 Pubmed: 40155375 ]

Sample:

• Heat shock protein transcriptional repressor hspr (Protein from Mycobacterium tuberculosis H37Rv)
• Bacterial proteasome activator (Protein from Mycobacterium tuberculosis H37Rv)
• M. tuberculosis bacterial proteasome activator bpa with bound substrate (Complex from Mycobacterium tuberculosis H37Rv)

truncated M. tuberculosis bacterial proteasome activator Bpa

Release date: April 2, 2025
Resolution: 3.5 Å
EM Method: Single-particle

von Rosen T, Zdanowicz R, El Hadeg Y, Afanasyev P, Boehringer D, Leitner A, Glockshuber R, Weber-Ban E

Nat Commun (2025)16 pp. 3042-3042 [**DOI:** doi:10.1038/s41467-025-58073-1 Pubmed: 40155375 ]

Sample:

• Truncated m. tuberculosis bacterial proteasome activator bpa (Complex from Mycobacterium tuberculosis H37Rv)
• Bacterial proteasome activator (Protein from Mycobacterium tuberculosis H37Rv)

Cryo-EM structure of the Bacterial Proteasome Activator Bpa of Mycobacterium tuberculosis

Release date: April 2, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8rgx
Q-score: 0.514

von Rosen T, Zdanowicz R, El Hadeg Y, Afanasyev P, Boehringer D, Leitner A, Glockshuber R, Weber-Ban E

Nat Commun (2025)16 pp. 3042-3042 [**DOI:** doi:10.1038/s41467-025-58073-1 Pubmed: 40155375 ]

Sample:

• Bacterial proteasome activator bpa of mycobacterium tuberculosis (Complex from Mycobacterium tuberculosis H37Rv)
• Bacterial proteasome activator (19 kDa, Protein from Mycobacterium tuberculosis H37Rv)

20S Proteasome core particle

Release date: March 12, 2025
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 9ce5
Q-score: 0.552

Turner M, Uday AB, Velyvis A, Rennella E, Zeytuni N, Vahidi S

Nat Commun (2025)16 pp. 3138-3138 [**Pubmed:** 40169579 DOI: doi:10.1038/s41467-025-58430-0 ]

Sample:

• Proteasome subunit beta (24 kDa, Protein from Mycobacterium tuberculosis)
• Proteasome subunit alpha (26 kDa, Protein from Mycobacterium tuberculosis)
• 20s proteasome core particle (Complex from Mycobacterium tuberculosis)

20S Proteasome core particle open gate variant

Release date: March 12, 2025
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 9ce7
Q-score: 0.56

Turner M, Uday AB, Velyvis A, Rennella E, Zeytuni N, Vahidi S

Nat Commun (2025)16 pp. 3138-3138 [**Pubmed:** 40169579 DOI: doi:10.1038/s41467-025-58430-0 ]

Sample:

• Proteasome subunit beta (24 kDa, Protein from Mycobacterium tuberculosis)
• 20s proteasome core particle open gate variant (Complex from Mycobacterium tuberculosis)
• Proteasome subunit alpha (26 kDa, Protein from Mycobacterium tuberculosis)

20S Proteasome core particle in complex with Ixazomib

Release date: March 12, 2025
Resolution: 2.61 Å
EM Method: Single-particle
Fitted PDBs: 9ce8
Q-score: 0.557

Turner M, Uday AB, Velyvis A, Rennella E, Zeytuni N, Vahidi S

Nat Commun (2025)16 pp. 3138-3138 [**Pubmed:** 40169579 DOI: doi:10.1038/s41467-025-58430-0 ]

Sample:

• [(1~{r})-1-[2-[[2,5-bis(chloranyl)phenyl]carbonylamino]ethanoylamino]-3-methyl-butyl]boronic acid (361 Da, Ligand)
• Proteasome subunit beta (24 kDa, Protein from Mycobacterium tuberculosis)
• Proteasome subunit alpha (26 kDa, Protein from Mycobacterium tuberculosis)
• 20s proteasome core particle in complex with ixazomib (Complex from Mycobacterium tuberculosis)

[Show more]

20S Proteasome core particle beta-T1A mutant

Release date: March 12, 2025
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 9ceb
Q-score: 0.573

Turner M, Uday AB, Velyvis A, Rennella E, Zeytuni N, Vahidi S

Nat Commun (2025)16 pp. 3138-3138 [**Pubmed:** 40169579 DOI: doi:10.1038/s41467-025-58430-0 ]

Sample:

• Proteasome subunit alpha (26 kDa, Protein from Mycobacterium tuberculosis)
• Proteasome subunit beta (24 kDa, Protein from Mycobacterium tuberculosis)
• 20s proteasome core particle beta-t1a mutant (Complex from Mycobacterium tuberculosis)

20S Proteasome core particle beta-T1A mutant auto-inhibited state (Frame 1)

Release date: March 12, 2025
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 9cee
Q-score: 0.545

Turner M, Uday AB, Velyvis A, Rennella E, Zeytuni N, Vahidi S

Nat Commun (2025)16 pp. 3138-3138 [**Pubmed:** 40169579 DOI: doi:10.1038/s41467-025-58430-0 ]

Sample:

• 20s proteasome core particle beta-t1a mutant off state (frame 1) (Complex from Mycobacterium tuberculosis)
• Proteasome subunit alpha (26 kDa, Protein from Mycobacterium tuberculosis)
• Proteasome subunit beta (24 kDa, Protein from Mycobacterium tuberculosis)

Sort by: Download

Showing 1 - 10 of 871. Page 1 of 88

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Statistics

Filter By

Current Database

• EMDB [837]
• EMPIAR [34]

Sample type

• Complex [755]
• Protein [697]
• Ligand [406]
• RNA [66]
• Sample [63]
• DNA [44]
• Cellular component [15]
• Cell [8]

Organism

• Homo sapiens [498]
• Saccharomyces cerevisiae [107]
• Saccharomyces cerevisiae [79]
• Thermoplasma acidophilum [61]
• Mycobacterium tuberculosis [36]
• Rattus norvegicus [25]
• Mus musculus [21]
• Saccharomyces cerevisiae [16]
• Chlamydomonas reinhardtii [11]
• Synthetic construct [11]
• Alphapapillomavirus 9 [9]
• Archaeoglobus fulgidus [8]
• Saccharomyces cerevisiae [8]
• Plasmodium falciparum [8]
• Mycobacterium tuberculosis [8]
• Bos taurus [8]
• Sus scrofa [7]
• Leishmania tarentolae [4]
• Trypanosoma brucei [4]
• Vairimorpha necatrix [3]
• Gallus gallus [3]
• Legionella pneumophila [3]
• Sus scrofa [3]
• (no species) [2]
• Phage display vector ptdisp [2]
• Trichomonas vaginalis [2]
• Leishmania donovani [2]
• Trypanosoma cruzi [2]
• Plasmodium falciparum [2]
• Canis lupus [2]
• Lama glama [2]
• Hepacivirus c [1]
• Human immunodeficiency virus 1 [1]
• Saccharomyces cerevisiae [1]
• Saccharomyces cerevisiae [1]
• Chaetomium thermophilum [1]
• Spinacia oleracea [1]
• Dictyostelium discoideum [1]
• Bacteriophage sp. [1]
• Lobophyllia hemprichii [1]
• Schizosaccharomyces pombe [1]
• Escherichia coli [1]
• Plasmodium falciparum [1]
• Plasmodium falciparum [1]
• Chaetomium thermophilum [1]
• Escherichia coli [1]
• Meleagris gallopavo [1]
• Pan troglodytes [1]

EM Method

• Single-particle [803]
• Subtomogram averaging [24]
• Tomography [10]

Resolution

• < 2Å [2]
• ≥ 2Å and < 3Å [146]
• ≥ 3Å and < 4Å [426]
• ≥ 4Å and < 5Å [106]
• ≥ 5Å and < 6Å [13]
• ≥ 6Å and < 8Å [61]
• ≥ 8Å and < 12Å [31]
• ≥ 12Å and < 16Å [7]
• ≥ 16Å and < 20Å [7]
• ≥ 20Å and < 30Å [20]
• ≥ 30Å [8]

Model molecular weight

• 50-100 kDa [10]
• 100-250 kDa [110]
• 250-500 kDa [101]
• 500-1000 kDa [223]
• 1-2 MDa [140]
• 2-5 MDa [40]
• 5-10 MDa [4]

Release Date

• 2025 [50]
• 2024 [179]
• 2023 [124]
• 2022 [115]
• 2021 [121]
• 2020 [51]
• 2019 [32]
• 2018 [62]
• 2017 [50]
• 2016 [34]
• 2015 [19]
• 2014 [6]
• 2013 [15]
• 2012 [7]
• 2011 [2]
• 2010 [3]
• 2009 [1]

Author by name

• Finley D [71]
• Mao Y [68]
• Lu Y [61]
• Baumeister W [57]
• Wang Y [47]
• Beck F [46]
• Schulman BA [43]
• Xu C [41]
• Zhang S [40]
• Wu Z [39]
• Li S [37]
• Cheng Y [35]
• Ouyang Q [35]
• Chen X [32]
• Zhu Y [32]
• Zhang Z [31]
• Dong Y [30]
• Li X [30]
• Wu J [30]
• Chen S [28]
• Plitzko JM [28]
• Rubinstein JL [27]
• Rudack T [27]
• Lander GC [26]
• Wang F [25]
• Martin A [24]
• Rennella E [24]
• Turner M [24]
• Uday AB [24]
• Vahidi S [24]
• Velyvis A [24]
• Wang WL [24]
• Zeytuni N [24]
• Pfeifer G [23]
• Zhang H [23]
• Zhao J [23]
• Von Gronau S [23]
• Mann M [22]
• Prabu JR [22]
• Yu Y [22]
• Cheng J [21]
• Li H [21]
• Yin D [21]
• Yin Y [21]
• Zhao L [21]
• Zou S [21]
• Beckmann R [20]
• Hurt E [20]
• Kirschner MW [20]
• Liu L [20]
• Ma YB [20]
• Berninghausen O [19]
• Hanna J [19]
• Pan M [19]
• Rawson S [19]
• Walsh Jr Rm [19]
• Xie Y [19]
• Zhang X [19]
• Benlekbir S [18]
• Botuyan MV [18]
• Cui G [18]
• Danev R [18]
• Devost D [18]
• Guo Q [18]
• Hebert TE [18]
• Hu Q [18]
• Ji AX [18]
• Keszei AFA [18]
• Kuntz DA [18]
• Mazhab-jafari MT [18]
• Mer G [18]
• Mian MUQ [18]
• Narayanan N [18]
• Nguyen DM [18]
• Petrin D [18]
• Pomroy NC [18]
• Prive GG [18]
• Rath DH [18]
• Rizk R [18]
• Yong D [18]
• Zhai A [18]
• Zhan W [18]
• Zhao D [18]
• Ai H [17]
• Bhandari J [17]
• Lau B [17]
• Liu Q [17]
• Sakata E [17]
• Sun S [17]
• Thompson JR [17]
• Cong Y [16]
• Draczkowski P [16]
• Goodall EA [16]
• Hsu STD [16]
• Matyskiela ME [16]
• Wang YS [16]
• Yu Z [16]
• Zhang J [16]
• Zhang K [16]
• Zheng Q [16]

Author by ORCID

• Mao Y [64]
• Zhang S [37]
• Schulman BA [30]
• Cheng Y [29]
• Dong Y [28]
• Finley D [25]
• Vahidi S [24]
• Zeytuni N [24]
• Martin A [24]
• Lander GC [24]
• Turner M [24]
• Uday AB [24]
• Wu Z [22]
• Plitzko JM [22]
• Zhu Y [22]
• Zou S [21]
• Rubinstein JL [21]
• Rawson S [19]
• Walsh Jr Rm [19]
• Hanna J [19]
• Devost D [18]
• Prive GG [18]
• Mer G [18]
• Hebert TE [18]
• Nguyen DM [18]
• Mazhab-jafari MT [18]
• Rath DH [18]
• Kuntz DA [18]
• Yong D [18]
• Mian MUQ [18]
• Pomroy NC [18]
• Li H [17]
• Lau B [17]
• Sakata E [17]
• Xu C [17]
• Zhang H [16]
• Goodall EA [16]
• Hurt E [16]
• Wang YS [16]
• Hsu STD [16]
• Prabu JR [16]
• Draczkowski P [16]
• Yao X [15]
• Koren I [15]
• Zhu X [15]
• Peng C [14]
• Yin Y [14]
• Cheng J [14]
• Liu L [13]
• Hill CP [13]
• Shen PS [13]
• Du J [13]
• Caffrey B [12]
• Xie Y [12]
• Zhao M [12]
• Pan M [12]
• Chiu PL [12]
• Nagy I [12]
• Price JC [12]
• Tuttle K [12]
• Roelofs J [12]
• Chittori S [12]
• Cruz VE [11]
• Sun L [11]
• Zhang Z [11]
• Erzberger JP [11]
• Glickman MH [11]
• Moresco EMY [11]
• Beutler B [11]
• Weirich CS [11]
• Huang B [11]
• Horn-ghetko D [11]
• Wang Y [11]
• Chen Z [11]
• Fisher ON [10]
• Huang X [10]
• Sahu I [10]
• Harper JW [10]
• Lee BH [10]
• Nandi P [10]
• Adolf F [10]
• Schubert HL [10]
• Shi Y [10]
• Thoma NH [10]
• Zhu J [9]
• Cramer P [9]
• Timms RT [9]
• Watson ER [9]
• Elledge SJ [9]
• Milkereit P [9]
• H De La Pena A [9]
• Griffin PR [9]
• Li S [9]
• Griesenbeck J [9]
• Fernandez-busnadiego R [9]
• Novick S [9]
• Zhang K [9]
• Xie SC [8]
• Southworth DR [8]
• Kokic G [8]

Journal

• NAT COMMUN [135]
• PNAS [111]
• MOL CELL [85]
• NATURE [80]
• BIORXIV [76]
• NAT STRUCT MOL BIOL [76]
• TO BE PUBLISHED [53]
• SCIENCE [36]
• ELIFE [32]
• STRUCTURE [31]
• CELL [20]
• J BIOL CHEM [19]
• EMBO J [15]
• NUCLEIC ACIDS RES [14]
• SCI ADV [10]
• PLOS ONE [9]
• INT J MOL SCI [8]
• ISCIENCE [8]
• J STRUCT BIOL [8]
• NAT CHEM BIOL [8]
• CELL REP [7]
• COMMUN CHEM [6]
• CELL DISCOV [5]
• LIFE SCI ALLIANCE [5]
• NAT METHODS [5]
• BIOORG.MED.CHEM. [4]
• CELL DEATH DIFFER. [4]
• J MED CHEM [4]
• MSPHERE [4]
• NAT MICROBIOL [4]
• BIOCHEM J [3]
• CELL RES [3]
• COMMUN BIOL [3]
• PLOS PATHOG [3]
• RES COMPUT MOL BIOL [3]
• STRUCTURE (LONDON, ENGLAND : 1993) [3]
• EMBO REP [2]
• INT J BIOL MACROMOL [2]
• PLOS BIOL [2]
• PROTEIN CELL [2]
• PROTEINS [2]
• RUSS J BIOORGANIC CHEM [2]
• SCI REP [2]
• ACS CENT SCI [1]
• ACS MED.CHEM.LETT. [1]
• ADV SCI [1]
• ANAL CHEM [1]
• ANGEW CHEM INT ED ENGL [1]
• ARXIV [1]
• BIOCHEM BIOPHYS RES COMMUN [1]
• CELL CHEM BIOL [1]
• CHEM [1]
• IUCRJ [1]
• MOL CELL PROTEOMICS [1]
• MOLECULES [1]
• NAT CHEM [1]
• PLANT COMMUN [1]
• PLANT COMMUN. [1]
• PLANT COMMUNICATIONS [1]
• PNAS NEXUS [1]

Software

• RELION [272]
• CRYOSPARC [188]
• CTFFIND [32]
• PYTOM [14]
• FREALIGN [13]
• CHIMERA [11]
• CISTEM [7]
• XMIPP [7]
• EMAN [6]
• TOM TOOLBOX [5]
• IMOD [4]
• TOMO3D [4]
• EMAN2 [3]
• EMAN2 SPARX [3]
• PHENIX [3]
• EMAN2/SPARX, FREALIGN [2]
• ETOMO, TOM, PYTOM [2]
• IMAGIC, SPIDER [2]
• ML3D [2]
• PARTICLE [2]
• STOPGAP [2]
• WARP [2]
• APPION, CTFFIND3, FINDEM, RELION [1]
• CHIMERA, MDFF [1]
• COOT, PHENIX [1]
• CRYOLO [1]
• CTFFIND3 [1]
• EMAN2, RELION, CTFFIND4 [1]
• EMAN2, SPARX [1]
• ETOMO [1]
• GCTF [1]
• IMAGIC [1]
• IMAGIC, SPIDER, EMAN [1]
• IMAGIC,SPIDER,IN-HOUSE,SOFTWARE [1]
• MATLAB [1]
• SIMPLE [1]
• SPIDER, TIGRIS, IMAGIC [1]
• TIGRIS, SPIDER, IMAGIC [1]
• TIGRIS, UNBLUR, FREALIGN [1]
• UCSF CHIMERAX [1]

Microscope

• FEI TITAN KRIOS [638]
• TFS KRIOS [44]
• FEI TECNAI F20 [31]
• FEI TALOS ARCTICA [28]
• FEI TECNAI ARCTICA [27]
• FEI POLARA 300 [17]
• TFS GLACIOS [17]
• FEI TECNAI 12 [6]
• FEI TECNAI 20 [5]
• FEI TECNAI SPIRIT [5]
• OTHER [4]
• JEOL 2200FS [3]
• JEOL 2100 [2]
• JEOL 2100F [2]
• JEOL 3200FSC [2]
• JEOL CRYO ARM 200 [2]
• FEI MORGAGNI [1]
• JEOL 3200FS [1]
• TFS TALOS [1]
• TFS TUNDRA [1]

Electron Source

• FIELD EMISSION GUN [824]
• LAB6 [8]
• OTHER [5]

Film or detector model

• GATAN K2 SUMMIT (4K X 4K) [303]
• GATAN K3 (6K X 4K) [177]
• GATAN K3 BIOQUANTUM (6K X 4K) [167]
• FEI FALCON IV (4K X 4K) [44]
• FEI FALCON III (4K X 4K) [32]
• FEI FALCON II (4K X 4K) [27]
• GATAN K2 QUANTUM (4K X 4K) [24]
• TVIPS TEMCAM-F816 (8K X 8K) [13]
• GATAN K2 (4K X 4K) [12]
• GATAN ULTRASCAN 4000 (4K X 4K) [5]
• OTHER [5]
• GENERIC GATAN (4K X 4K) [4]
• DIRECT ELECTRON DE-20 (5K X 3K) [3]
• FEI EAGLE (2K X 2K) [3]
• GENERIC TVIPS (4K X 4K) [3]
• GATAN K2 BASE (4K X 4K) [2]
• GATAN MULTISCAN [2]
• KODAK SO-163 FILM [2]
• TVIPS TEMCAM-F415 (4K X 4K) [2]
• TVIPS TEMCAM-F416 (4K X 4K) [2]
• FEI CETA (4K X 4K) [1]
• FEI EAGLE (4K X 4K) [1]
• TFS FALCON 4I (4K X 4K) [1]

EMPIAR Experiment type

• EMDB [34]

EMPIAR Image category

• MICROGRAPHS - MULTIFRAME [20]
• MICROGRAPHS - SINGLE FRAME [14]
• TILT SERIES [5]
• PICKED PARTICLES - MULTIFRAME - PROCESSED [3]
• PICKED PARTICLES - SINGLE FRAME - PROCESSED [3]

External links

• UniProt [648]
• AlphaFold DB [637]
• PDBe-Kb [633]
• PDB [630]
• Pfam [592]
• Gene Ontology [588]
• ChEMBL [388]
• ChEBI [387]
• DrugBank [381]
• InterPro [348]
• Complex Portal [333]
• EMPIAR [120]
• EMDB [34]
• SCOP2 [14]
• CATH [11]