Search: MDC1 - The Human Protein Atlas (original) (raw)

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8 GENES FOUNDi The search result lists the genes found by the search function. The show/hide columns function can be used to customize the columns in the search result list. To refine the search results with specific criterias, use the "Fields". For more information and examples see the Search help. Data for all genes included in the search result can be downloaded in different formats, links are found in the upper right corner of the search result page: XML - An XML-file with more extensive data (including antigen sequences, protein expression, transcriptomics data, external references and more (see XSD)) for up to 10000 genes. RDF - Structured nanopublication data for the tissue annotations TSV - Tab-separated file with a subset of the data available in the XML-file JSON - JSON formatted file with the same subset of the data available in the TSV-file Custom - Custom dataset defined by the user in TSV or JSON format. Useful if you only need some of the data columns available in the TSV/JSON format
Gene Genei Gene name according to HGNC. Gene synonymi Synonyms according to Ensembl and Entrez. Ensembl gene idi Gene identification number according to Ensembl. Gene descriptioni Gene description according to HGNC. Uniprot accession Chromosome Chromosome positioni This paragraph provides an overview of proteins elevated in brain from a whole body perspective and proteins elevated in regions of the brain from a whole brain perspective. Protein classi Protein class(es) of the gene product according to selected gene lists. List of protein classes. Biological processi Keywords assigned by UniProt to proteins because they are involved in a particular biological process. Molecular functioni Keywords assigned by UniProt to proteins due to their particular molecular function. Disease involvementi Disease related keywords assigned by UniProt combined with Cancer-related genes and FDA approved drug targets Evidence (summary)i Protein evidence scores are generated from several independent sources and are classified as evidence at i) protein level, ii) transcript level, iii) no evidence, or iv) not available. HPA evidence UniProt evidence NeXtProt evidence Tissuei The Tissue resource contains information regarding the expression profile of human gene both on the mRNA and protein level. The protein expression data from 44 normal tissue types are derived from antibody-based profiling using immunohistchemistry. The green piechart indicates the level of reliability of the analyzed protein expression pattern based on available RNA-seq data, protein/gene characterization and immunohistochemical data from one or several antibodies with non-overlapping epitopes. Braini The Brain resource describes gene expression in various regions of the human, mouse and pig brain, both on the mRNA and protein level. Single celli The Single Cell resource presents RNA expression profiles in single cell types based on single cell and deconvolution of bulk transcriptomics, including RNA seq of FACS sorted immune cells. subcellulari The Subcellular resource contains high-resolution images showing the subcellular distribution of proteins and the RNA sequencing data of various tissue culture cell lines. The green piechart indicates the level of reliability of the detection protein localization based on available protein/gene characterization data and antibody validation level. Canceri The Cancer resource contains mRNA and protein expression data from 17 different forms of human cancer. Correlation analysis based on mRNA expression levels of human genes in cancer tissue and the clinical outcome for almost 8000 cancer patients is presented in a gene-centric manner. The green piechart indicates the level of reliability of the analyzed protein expression pattern based on available RNA-seq data, protein/gene characterization and immunohistochemical data from one or several antibodies with non-overlapping epitopes. Bloodi The Blood resource describes protein levels in blood in healthy persons and patients with different diseases. Estimated plasma concentrations of the proteins detected in human blood from mass spectrometry-based proteomics studies and published immune assay data as well as the protein levels in blood in healthy and disease cohorts based on proximity extension assay (PEA) are presented. Cell linei The Cell line resource contains information regarding mRNA expression profiles of human protein-coding genes for a large variety of cell lines. Structure & Interactioni The Structure & Interaction resource contains predicted 3D structures as well as protein-protein interaction and metabolic networks. Predicted 3D structures for most proteins and their related isoforms, interaction networks based on data from different databases, and pathways for metabolic proteins are presented with options to highlight features such as antigen sequences and known and predicted missense variants in the structures as well as the location and expression of the interactors in the networks. RNA category human RNA tissue specificityi Classification of mRNA expression specificity. RNA tissue distributioni Classification of distribution of mRNA expression. RNA tissue specificity score RNA tissue specific nTPM RNA tissue nTPM max in non-specific RNA single cell type specificityi Classification of mRNA expression specificity. RNA single cell type distributioni Classification of distribution of mRNA expression. RNA single cell type specificity score RNA single cell type specific nTPM RNA single nuclei brain specificityi Classification of mRNA expression specificity. RNA single nuclei brain distributioni Classification of distribution of mRNA expression. RNA single nuclei brain specificity score RNA single nuclei brain specific nTPM RNA cancer specificityi Classification of mRNA expression specificity. RNA cancer distributioni Classification of distribution of mRNA expression. RNA cancer specificity score RNA cancer specific FPKM RNA brain regional specificityi Classification of mRNA expression specificity. RNA brain regional distributioni Classification of distribution of mRNA expression. RNA brain regional specificity score RNA brain regional specific nTPM RNA blood cell specificityi Classification of mRNA expression specificity. RNA blood cell distributioni Classification of distribution of mRNA expression. RNA blood cell specificity score RNA blood cell specific nTPM RNA blood lineage specificityi Classification of mRNA expression specificity. RNA blood lineage distributioni Classification of distribution of mRNA expression. RNA blood lineage specificity score RNA blood lineage specific nTPM RNA cell line specificityi Classification of mRNA expression specificity. RNA cell line distributioni Classification of distribution of mRNA expression. RNA cell line specificity score RNA cell line specific nTPM RNA tissue cell type enrichmentRNA category pig/mouse RNA mouse brain regional specificityi Classification of mRNA expression specificity. RNA mouse brain regional distributioni Classification of distribution of mRNA expression. RNA mouse brain regional specificity score RNA mouse brain regional specific nTPM RNA pig brain regional specificityi Classification of mRNA expression specificity. RNA pig brain regional distributioni Classification of distribution of mRNA expression. RNA pig brain regional specificity score RNA pig brain regional specific nTPMAnnotation Antibody IDi Antibodies used for immunohistochemistry (results presented in Tissue, Pathology and Brain Atlas) and immunocytochemistry/IF (results presented in Cell Atlas) assays. The assays are described in detail in Assays & annotation. Reliability (IH)i Reliability score, divided into Enhanced, Supported, Approved, or Uncertain, is evaluated in normal tissues and based on consistency between antibody staining pattern, available RNA-Seq and gene/protein characterization data, as well as similarity between independent antibodies targeting the same protein. Reliability (Mouse Brain)i Reliability score, divided into Supported or Uncertain, is set for all genes and indicates the level of reliability of the analyzed protein expression pattern based on available protein/RNA/gene characterization data. Reliability (IF)i Reliability score, divided into Enhanced, Supported, Approved, or Uncertain, is evaluated in cell lines and based on consistency between antibody staining pattern, available RNA-Seq and gene/protein characterization data, as well as similarity between independent antibodies targeting the same protein. IH abundance (Normal Tissue)i A summary of protein expression levels in the analyzed normal tissues. Annotation of protein expression is described in detail in Assays & annotation. Subcellular locationi Subcellular localization according to immunocytochemistry/IF analysis. Secretome locationi All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:secreted into bloodlocally secreted in a tissue or from a cell typeor actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes. Secretome functioni All genes belonging to the secretome have been classified according to function based on Uniprot molecular function and biological processes keywords. The functional annotations are prioritized according to the following hierarchy: Blood coagulation, Complement pathway, Acute phase, Cytokine, Hormone, Neuropeptide, Growth factor, Receptor, Transport, Developmental protein, Defence, Enzyme, Enzyme inhibitor, Transcription, Immunity, Cell adhesion, Other and each gene is assigned a single function. Cell Cycle Dependent Proteini Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Cell Cycle Dependent Transcripti Cell cycle dependency of RNA expression in the FUCCI u-2 OS cell line, determined by RNA sequencing and monitoring of cell cycle stage in single cells. Genes encoding assayed transcripts are classified as CCD transcript "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Cancer prognostic p-valuei P-value of Kaplan-Meier analysis for all cancers where high expression of the gene is associated with favorable prognosis (green) or unfavorable prognosis (red) with regard to patient survival. Blood expression cluster Tissue expression cluster Brain expression cluster Cell line expression cluster Single cell expression cluster Num protein interactions
1. Select data columns:i Change the selections below to determine which columns to have in the final file. The ensembl gene id is always added to have a identifier present in the output. A whole group can be selected/unselected as well as individual data columns by toggling the checkboxes. Expand Genei Gene name according to HGNC. Gene synonymi Synonyms according to Ensembl and Entrez. Ensembl gene idi Gene identification number according to Ensembl. Gene descriptioni Gene description according to HGNC. Uniprot accession Chromosome Chromosome positioni This paragraph provides an overview of proteins elevated in brain from a whole body perspective and proteins elevated in regions of the brain from a whole brain perspective. Protein classi Protein class(es) of the gene product according to selected gene lists. List of protein classes. Biological processi Keywords assigned by UniProt to proteins because they are involved in a particular biological process. Molecular functioni Keywords assigned by UniProt to proteins due to their particular molecular function. Disease involvementi Disease related keywords assigned by UniProt combined with Cancer-related genes and FDA approved drug targets Expand Evidence (summary)i Protein evidence scores are generated from several independent sources and are classified as evidence at i) protein level, ii) transcript level, iii) no evidence, or iv) not available. HPA evidence UniProt evidence NeXtProt evidence Expand RNA tissue specificityi Classification of mRNA expression specificity. RNA tissue distributioni Classification of distribution of mRNA expression. RNA tissue specificity score RNA tissue specific nTPM RNA single cell type specificityi Classification of mRNA expression specificity. RNA single cell type distributioni Classification of distribution of mRNA expression. RNA single cell type specificity score RNA single cell type specific nTPM RNA single nuclei brain specificityi Classification of mRNA expression specificity. RNA single nuclei brain distributioni Classification of distribution of mRNA expression. RNA single nuclei brain specificity score RNA single nuclei brain specific nTPM RNA cancer specificityi Classification of mRNA expression specificity. RNA cancer distributioni Classification of distribution of mRNA expression. RNA cancer specificity score RNA cancer specific FPKM RNA brain regional specificityi Classification of mRNA expression specificity. RNA brain regional distributioni Classification of distribution of mRNA expression. RNA brain regional specificity score RNA brain regional specific nTPM RNA blood cell specificityi Classification of mRNA expression specificity. RNA blood cell distributioni Classification of distribution of mRNA expression. RNA blood cell specificity score RNA blood cell specific nTPM RNA blood lineage specificityi Classification of mRNA expression specificity. RNA blood lineage distributioni Classification of distribution of mRNA expression. RNA blood lineage specificity score RNA blood lineage specific nTPM RNA cell line specificityi Classification of mRNA expression specificity. RNA cell line distributioni Classification of distribution of mRNA expression. RNA cell line specificity score RNA cell line specific nTPM RNA tissue cell type enrichment Expand RNA mouse brain regional specificityi Classification of mRNA expression specificity. RNA mouse brain regional distributioni Classification of distribution of mRNA expression. RNA mouse brain regional specificity score RNA mouse brain regional specific nTPM RNA pig brain regional specificityi Classification of mRNA expression specificity. RNA pig brain regional distributioni Classification of distribution of mRNA expression. RNA pig brain regional specificity score RNA pig brain regional specific nTPM Expand Antibody IDi Antibodies used for immunohistochemistry (results presented in Tissue, Pathology and Brain Atlas) and immunocytochemistry/IF (results presented in Cell Atlas) assays. The assays are described in detail in Assays & annotation. Reliability (IH)i Reliability score, divided into Enhanced, Supported, Approved, or Uncertain, is evaluated in normal tissues and based on consistency between antibody staining pattern, available RNA-Seq and gene/protein characterization data, as well as similarity between independent antibodies targeting the same protein. Reliability (Mouse Brain)i Reliability score, divided into Supported or Uncertain, is set for all genes and indicates the level of reliability of the analyzed protein expression pattern based on available protein/RNA/gene characterization data. Reliability (IF)i Reliability score, divided into Enhanced, Supported, Approved, or Uncertain, is evaluated in cell lines and based on consistency between antibody staining pattern, available RNA-Seq and gene/protein characterization data, as well as similarity between independent antibodies targeting the same protein. Subcellular locationi Subcellular localization according to immunocytochemistry/IF analysis. Secretome locationi All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:secreted into bloodlocally secreted in a tissue or from a cell typeor actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes. Cell Cycle Dependent Proteini Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Cell Cycle Dependent Transcripti Cell cycle dependency of RNA expression in the FUCCI u-2 OS cell line, determined by RNA sequencing and monitoring of cell cycle stage in single cells. Genes encoding assayed transcripts are classified as CCD transcript "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Blood expression cluster Tissue expression cluster Brain expression cluster Cell line expression cluster Single cell expression cluster Num protein interactions Subcellular main location Subcellular additional location Antibody RRIDi All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:secreted into bloodlocally secreted in a tissue or from a cell typeor actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes. Expand Immunoassay [pg/L] Mass spectrometry [pg/L] Expand Bladder Urothelial Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Breast Invasive Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Breast Invasive Carcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Colon Adenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Colon Adenocarcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Glioblastoma Multiforme (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Glioblastoma Multiforme (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Head and Neck Squamous Cell Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Kidney Chromophobe (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Kidney Renal Clear Cell Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Kidney Renal Clear Cell Carcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Kidney Renal Papillary Cell Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Liver Hepatocellular Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Liver Hepatocellular Carcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Lung Adenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Lung Adenocarcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Lung Squamous Cell Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Lung Squamous Cell Carcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Ovary Serous Cystadenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Ovary Serous Cystadenocarcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Pancreatic Adenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Pancreatic Adenocarcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Prostate Adenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Rectum Adenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Rectum Adenocarcinoma (validation)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Skin Cuteneous Melanoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Stomach Adenocarcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Testicular Germ Cell Tumor (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Thyroid Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Uterine Corpus Endometrial Carcinoma (TCGA)i Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking. Expand Tissue Blood Brain Single Cell Type Single nuclei brain Expand Adipose tissue [nTPM] Adrenal gland [nTPM] Amygdala [nTPM] Appendix [nTPM] Basal ganglia [nTPM] Bone marrow [nTPM] Breast [nTPM] Cerebellum [nTPM] Cerebral cortex [nTPM] Cervix [nTPM] Choroid plexus [nTPM] Colon [nTPM] Duodenum [nTPM] Endometrium 1 [nTPM] Epididymis [nTPM] Esophagus [nTPM] Fallopian tube [nTPM] Gallbladder [nTPM] Heart muscle [nTPM] Hippocampal formation [nTPM] Hypothalamus [nTPM] Kidney [nTPM] Liver [nTPM] Lung [nTPM] Lymph node [nTPM] Midbrain [nTPM] Ovary [nTPM] Pancreas [nTPM] Parathyroid gland [nTPM] Pituitary gland [nTPM] Placenta [nTPM] Prostate [nTPM] Rectum [nTPM] Retina [nTPM] Salivary gland [nTPM] Seminal vesicle [nTPM] Skeletal muscle [nTPM] Skin 1 [nTPM] Small intestine [nTPM] Smooth muscle [nTPM] Spinal cord [nTPM] Spleen [nTPM] Stomach 1 [nTPM] Testis [nTPM] Thymus [nTPM] Thyroid gland [nTPM] Tongue [nTPM] Tonsil [nTPM] Urinary bladder [nTPM] Vagina [nTPM] Expand Basophil [nTPM] Classical monocyte [nTPM] Eosinophil [nTPM] GdT-cell [nTPM] Intermediate monocyte [nTPM] MAIT T-cell [nTPM] Memory B-cell [nTPM] Memory CD4 T-cell [nTPM] Memory CD8 T-cell [nTPM] Myeloid DC [nTPM] Naive B-cell [nTPM] Naive CD4 T-cell [nTPM] Naive CD8 T-cell [nTPM] Neutrophil [nTPM] NK-cell [nTPM] Non-classical monocyte [nTPM] Plasmacytoid DC [nTPM] T-reg [nTPM] Total PBMC [nTPM] Expand Amygdala [nTPM] Basal ganglia [nTPM] Cerebellum [nTPM] Cerebral cortex [nTPM] Choroid plexus [nTPM] Hippocampal formation [nTPM] Hypothalamus [nTPM] Medulla oblongata [nTPM] Midbrain [nTPM] Pons [nTPM] Spinal cord [nTPM] Thalamus [nTPM] White matter [nTPM] Expand Adipocytes [nTPM] Alveolar cells type 1 [nTPM] Alveolar cells type 2 [nTPM] Astrocytes [nTPM] B-cells [nTPM] Basal keratinocytes [nTPM] Basal prostatic cells [nTPM] Basal respiratory cells [nTPM] Basal squamous epithelial cells [nTPM] Bipolar cells [nTPM] Breast glandular cells [nTPM] Breast myoepithelial cells [nTPM] Cardiomyocytes [nTPM] Cholangiocytes [nTPM] Ciliated cells [nTPM] Club cells [nTPM] Collecting duct cells [nTPM] Cone photoreceptor cells [nTPM] Cytotrophoblasts [nTPM] Dendritic cells [nTPM] Distal enterocytes [nTPM] Distal tubular cells [nTPM] Ductal cells [nTPM] Early spermatids [nTPM] Endometrial stromal cells [nTPM] Endothelial cells [nTPM] Enteroendocrine cells [nTPM] Erythroid cells [nTPM] Excitatory neurons [nTPM] Exocrine glandular cells [nTPM] Extravillous trophoblasts [nTPM] Fibroblasts [nTPM] Gastric mucus-secreting cells [nTPM] Glandular and luminal cells [nTPM] Granulocytes [nTPM] Granulosa cells [nTPM] Hepatocytes [nTPM] Hofbauer cells [nTPM] Horizontal cells [nTPM] Inhibitory neurons [nTPM] Intestinal goblet cells [nTPM] Ionocytes [nTPM] Kupffer cells [nTPM] Langerhans cells [nTPM] Late spermatids [nTPM] Leydig cells [nTPM] Lymphatic endothelial cells [nTPM] Macrophages [nTPM] Melanocytes [nTPM] Mesothelial cells [nTPM] Microglial cells [nTPM] Monocytes [nTPM] Mucus glandular cells [nTPM] Muller glia cells [nTPM] NK-cells [nTPM] Oligodendrocyte precursor cells [nTPM] Oligodendrocytes [nTPM] Oocytes [nTPM] Ovarian stromal cells [nTPM] Pancreatic endocrine cells [nTPM] Paneth cells [nTPM] Peritubular cells [nTPM] Plasma cells [nTPM] Prostatic glandular cells [nTPM] Proximal enterocytes [nTPM] Proximal tubular cells [nTPM] Rod photoreceptor cells [nTPM] Salivary duct cells [nTPM] Schwann cells [nTPM] Secretory cells [nTPM] Serous glandular cells [nTPM] Sertoli cells [nTPM] Skeletal myocytes [nTPM] Smooth muscle cells [nTPM] Spermatocytes [nTPM] Spermatogonia [nTPM] Squamous epithelial cells [nTPM] Suprabasal keratinocytes [nTPM] Syncytiotrophoblasts [nTPM] T-cells [nTPM] Undifferentiated cells [nTPM] Expand Amygdala excitatory [nTPM] Astrocyte [nTPM] Bergmann glia [nTPM] Central nervous system macrophage [nTPM] Cerebellar inhibitory [nTPM] CGE interneuron [nTPM] Choroid plexus epithelial cell [nTPM] Committed oligodendrocyte precursor [nTPM] Deep-layer corticothalamic and 6b [nTPM] Deep-layer intratelencephalic [nTPM] Deep-layer near-projecting [nTPM] Eccentric medium spiny neuron [nTPM] Endothelial cell [nTPM] Ependymal cell [nTPM] Fibroblast [nTPM] Hippocampal CA1-3 [nTPM] Hippocampal CA4 [nTPM] Hippocampal dentate gyrus [nTPM] LAMP5-LHX6 and Chandelier [nTPM] Leukocyte [nTPM] Lower rhombic lip [nTPM] Mammillary body [nTPM] Medium spiny neuron [nTPM] MGE interneuron [nTPM] Midbrain-derived inhibitory [nTPM] Miscellaneous [nTPM] Oligodendrocyte [nTPM] Oligodendrocyte precursor cell [nTPM] Pericyte [nTPM] Splatter [nTPM] Thalamic excitatory [nTPM] Upper rhombic lip [nTPM] Upper-layer intratelencephalic [nTPM] Vascular associated smooth muscle cell [nTPM] Expand Adrenocortical cancer (1 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Bile duct cancer (7 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Bladder cancer (26 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Bone cancer (21 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Brain cancer (80 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Breast cancer (62 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Cervical cancer (8 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Colorectal cancer (63 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Esophageal cancer (27 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Gallbladder cancer (1 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Gastric cancer (42 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Head and neck cancer (38 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Kidney cancer (35 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Leukemia (93 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Liver cancer (24 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Lung cancer (232 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Lymphoma (76 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Myeloma (34 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Neuroblastoma (17 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Non-cancerous (63 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Ovarian cancer (59 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Pancreatic cancer (46 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Prostate cancer (8 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Rhabdoid (14 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Sarcoma (15 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Skin cancer (62 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Testis cancer (1 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Thyroid cancer (11 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Uncategorized (11 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Uterine cancer (29 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. 2. Select format to download:i Selecting of format. Clicking one of the Downlod boxes will download a file in the corresponding format with the selected data columns for the genes shown in the search result. The copy boxes will give you a link to the file if you want to share it or save for later as a reference. 1. Select report data: Expand Adipose tissue [nTPM] Adrenal gland [nTPM] Amygdala [nTPM] Appendix [nTPM] Basal ganglia [nTPM] Bone marrow [nTPM] Breast [nTPM] Cerebellum [nTPM] Cerebral cortex [nTPM] Cervix [nTPM] Choroid plexus [nTPM] Colon [nTPM] Duodenum [nTPM] Endometrium 1 [nTPM] Epididymis [nTPM] Esophagus [nTPM] Fallopian tube [nTPM] Gallbladder [nTPM] Heart muscle [nTPM] Hippocampal formation [nTPM] Hypothalamus [nTPM] Kidney [nTPM] Liver [nTPM] Lung [nTPM] Lymph node [nTPM] Midbrain [nTPM] Ovary [nTPM] Pancreas [nTPM] Parathyroid gland [nTPM] Pituitary gland [nTPM] Placenta [nTPM] Prostate [nTPM] Rectum [nTPM] Retina [nTPM] Salivary gland [nTPM] Seminal vesicle [nTPM] Skeletal muscle [nTPM] Skin 1 [nTPM] Small intestine [nTPM] Smooth muscle [nTPM] Spinal cord [nTPM] Spleen [nTPM] Stomach 1 [nTPM] Testis [nTPM] Thymus [nTPM] Thyroid gland [nTPM] Tongue [nTPM] Tonsil [nTPM] Urinary bladder [nTPM] Vagina [nTPM] Expand Basophil [nTPM] Classical monocyte [nTPM] Eosinophil [nTPM] GdT-cell [nTPM] Intermediate monocyte [nTPM] MAIT T-cell [nTPM] Memory B-cell [nTPM] Memory CD4 T-cell [nTPM] Memory CD8 T-cell [nTPM] Myeloid DC [nTPM] Naive B-cell [nTPM] Naive CD4 T-cell [nTPM] Naive CD8 T-cell [nTPM] Neutrophil [nTPM] NK-cell [nTPM] Non-classical monocyte [nTPM] Plasmacytoid DC [nTPM] T-reg [nTPM] Total PBMC [nTPM] Expand Amygdala [nTPM] Basal ganglia [nTPM] Cerebellum [nTPM] Cerebral cortex [nTPM] Choroid plexus [nTPM] Hippocampal formation [nTPM] Hypothalamus [nTPM] Medulla oblongata [nTPM] Midbrain [nTPM] Pons [nTPM] Spinal cord [nTPM] Thalamus [nTPM] White matter [nTPM] Expand Adipocytes [nTPM] Alveolar cells type 1 [nTPM] Alveolar cells type 2 [nTPM] Astrocytes [nTPM] B-cells [nTPM] Basal keratinocytes [nTPM] Basal prostatic cells [nTPM] Basal respiratory cells [nTPM] Basal squamous epithelial cells [nTPM] Bipolar cells [nTPM] Breast glandular cells [nTPM] Breast myoepithelial cells [nTPM] Cardiomyocytes [nTPM] Cholangiocytes [nTPM] Ciliated cells [nTPM] Club cells [nTPM] Collecting duct cells [nTPM] Cone photoreceptor cells [nTPM] Cytotrophoblasts [nTPM] Dendritic cells [nTPM] Distal enterocytes [nTPM] Distal tubular cells [nTPM] Ductal cells [nTPM] Early spermatids [nTPM] Endometrial stromal cells [nTPM] Endothelial cells [nTPM] Enteroendocrine cells [nTPM] Erythroid cells [nTPM] Excitatory neurons [nTPM] Exocrine glandular cells [nTPM] Extravillous trophoblasts [nTPM] Fibroblasts [nTPM] Gastric mucus-secreting cells [nTPM] Glandular and luminal cells [nTPM] Granulocytes [nTPM] Granulosa cells [nTPM] Hepatocytes [nTPM] Hofbauer cells [nTPM] Horizontal cells [nTPM] Inhibitory neurons [nTPM] Intestinal goblet cells [nTPM] Ionocytes [nTPM] Kupffer cells [nTPM] Langerhans cells [nTPM] Late spermatids [nTPM] Leydig cells [nTPM] Lymphatic endothelial cells [nTPM] Macrophages [nTPM] Melanocytes [nTPM] Mesothelial cells [nTPM] Microglial cells [nTPM] Monocytes [nTPM] Mucus glandular cells [nTPM] Muller glia cells [nTPM] NK-cells [nTPM] Oligodendrocyte precursor cells [nTPM] Oligodendrocytes [nTPM] Oocytes [nTPM] Ovarian stromal cells [nTPM] Pancreatic endocrine cells [nTPM] Paneth cells [nTPM] Peritubular cells [nTPM] Plasma cells [nTPM] Prostatic glandular cells [nTPM] Proximal enterocytes [nTPM] Proximal tubular cells [nTPM] Rod photoreceptor cells [nTPM] Salivary duct cells [nTPM] Schwann cells [nTPM] Secretory cells [nTPM] Serous glandular cells [nTPM] Sertoli cells [nTPM] Skeletal myocytes [nTPM] Smooth muscle cells [nTPM] Spermatocytes [nTPM] Spermatogonia [nTPM] Squamous epithelial cells [nTPM] Suprabasal keratinocytes [nTPM] Syncytiotrophoblasts [nTPM] T-cells [nTPM] Undifferentiated cells [nTPM] Expand Amygdala excitatory [nTPM] Astrocyte [nTPM] Bergmann glia [nTPM] Central nervous system macrophage [nTPM] Cerebellar inhibitory [nTPM] CGE interneuron [nTPM] Choroid plexus epithelial cell [nTPM] Committed oligodendrocyte precursor [nTPM] Deep-layer corticothalamic and 6b [nTPM] Deep-layer intratelencephalic [nTPM] Deep-layer near-projecting [nTPM] Eccentric medium spiny neuron [nTPM] Endothelial cell [nTPM] Ependymal cell [nTPM] Fibroblast [nTPM] Hippocampal CA1-3 [nTPM] Hippocampal CA4 [nTPM] Hippocampal dentate gyrus [nTPM] LAMP5-LHX6 and Chandelier [nTPM] Leukocyte [nTPM] Lower rhombic lip [nTPM] Mammillary body [nTPM] Medium spiny neuron [nTPM] MGE interneuron [nTPM] Midbrain-derived inhibitory [nTPM] Miscellaneous [nTPM] Oligodendrocyte [nTPM] Oligodendrocyte precursor cell [nTPM] Pericyte [nTPM] Splatter [nTPM] Thalamic excitatory [nTPM] Upper rhombic lip [nTPM] Upper-layer intratelencephalic [nTPM] Vascular associated smooth muscle cell [nTPM] Expand Adrenocortical cancer (1 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Bile duct cancer (7 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Bladder cancer (26 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Bone cancer (21 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Brain cancer (80 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Breast cancer (62 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Cervical cancer (8 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Colorectal cancer (63 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Esophageal cancer (27 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Gallbladder cancer (1 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Gastric cancer (42 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Head and neck cancer (38 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Kidney cancer (35 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Leukemia (93 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Liver cancer (24 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Lung cancer (232 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Lymphoma (76 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Myeloma (34 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Neuroblastoma (17 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Non-cancerous (63 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Ovarian cancer (59 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Pancreatic cancer (46 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Prostate cancer (8 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Rhabdoid (14 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Sarcoma (15 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Skin cancer (62 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Testis cancer (1 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Thyroid cancer (11 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Uncategorized (11 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. Uterine cancer (29 cell lines) [nTPM]i Normalized gene expression ("nTPM") for each cell line in primary cancer group.All cell lines included are listed here. 2. Select report format: barChart boxPlot
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