CRISPR RGEN Tools (original) (raw)
Homo sapiens (GRCh38/hg38) - Human
Homo sapiens (hg19) - Human
Mus musculus (mm10) - Mouse
Bos taurus (bosTau7) - Cow
Canis familiaris (canFam3) - Dog
Rattus norvegicus (rn5) - Rat
Sus scrofa (susScr11) - Pig
Danio rerio (danRer7) - Zebrafish
Macaca mulatta(rheMac3) - Monkey
Xenopus tropicalis (JGI 4.2/xenTro3) - Western clawed frog
Xenopus tropicalis (JGI 7.1) - Western clawed frog
Xenopus laevis (JGI 7.1) - African clawed frog
Cricetulus griseus (v1.0) - Chinese Hamster
Xenopus tropicalis (JGI 8.0) - Western clawed frog
Xenopus tropicalis (JGI 9.0) - Western clawed frog
Xenopus laevis (JGI 9.1) - African clawed frog
Macaca fascicularis (5.0) - Crab-eating macaque
Danio rerio (GRCz10) - Zebrafish
Rattus norvegicus (Rnor 6.0) - Rat
Equus caballus (EquCab2) - Horse
Oryctolagus cuniculus (OryCun2) - Rabbit
Mesocricetus auratus (MesAur1.0) - Golden hamster
Felis catus (6.2) - Cat
Mochrtus ochrogaster (AHZW01) - Prairie vole
Bos taurus (bosTau8) - Cow
Callithrix jacchus (calJac3) -marmoset
Pimephales promelas (SOAPdenovo v. 2) - fathead minnow
ovis_aries (Oar_v3.1) - sheep
Chlorocebus_sabeus (AQIB01) - green monkey
Gallus gallus (Galgal4) - Chicken
Oreochromis niloticus (ASM185804v2)
Capra hircus (ARS1) - goat
Peromyscus maniculatus (Pman_1.0) - North American deer mouse
Macaca mulatta (Mmul_8.0.1) - Monkey
Cricetulus griseus (CriGri_1.0) - Chinese hamster
Cavia porcellus (Cavpor3.0) -guinea pig
Danio rerio (GRCz11) - zebrafish
Mus musculus (mm9) - Mouse
Anas platyrhynchos (BGI_duck_1.0) - duck
Gallus gallus (Gallus_gallus-5.0) - Chicken
Salmo salar (ICSASG_v2) -Atlantic salmon
Cyprinus carpio (common carp genome)
Oncorhynchus tshawytscha (Otsh_v1.0) - Chinook salmon
Human Mitochondria genome (NC_012920.1)
BalbC/J mouse Mitochondria genome (AJ512208.1)
Bos taurus (ARS UCD1.2)
Paralichthys olivaceus (Flounder_ref_guided_V1.0)
Myotis lucifugus (Myoluc2.0)
Rousettus aegyptiacus (Raegyp2.0)
Tree shrew (TS_20 long-read)
Ambystoma mexicanum (ASM291563v2) -axolotl
Gallus gallus (GRCg6a) - chicken
Ictalurus punctatus (GCA_001660625.3) - Channel catfish
Mustela putorius furo (MusPutFur1.0) - Ferret
Erinaceus_europaeus (GCF_000296755.1)
Macaca mulatta (Mmul_10)
Macaca fascicularis (Macaca_fascicularis_5.0)
Pagrus major (Pmaj_1.0)
Petromyzon_marinus ()
Homo sapiens (CHM13 T2T v1.1) - Human
Ovis aries (ARS-UI_Ramb_v2.0) - Sheep
Equus caballus (EquCab3.0) - horse
Epinephelus coioides () - Orange-spotted grouper
Anabas testudineus (fAnaTes1.2) - Climbing perch
Bubalus bubalis (NDDB_SH_1)
Sus scrofa (Large white v1 from ensembl) - pig
Homo sapiens (T2T_CHM13v2) - Human
Salmo salar (USDA_NASsal_1.1) - Atlantic salmon
Vulpes lagopus (ASM1834538v1) - Arctic fox
Takifugu rubripes (fTakRub1.3 from ENA)
Macaca nemestrina (Mnem_1.0)
Eptesicus fuscus (EptFus1.0) - Big brown bat
Pteropus alecto (ASM32557v1) - Black flying fox
Oncorhynchus mykiss (USDA_OmykA_1.1) - rainbow trout
Macaca fascicularis (6.0) - Crab-eating macaque
Dicentrarchus labrax - (European seabass)
Equus asinus (ASM1607732v2) - Ass
Nothobranchius furzeri - Turquoise killifish
Elephas maximus indicus - Indian elephant
Labeo rohita (GCF_022985175.1) - Rohu
Anolis sagrei - Brown anole
Eublepharis macularius - Leopard gecko
Callithrix jacchus (calJac4) -marmoset
Epinephelus lanceolatus - Giant grouper
Rattus norveticus (Norway rat) - (GCF_015227675.2)
Ambystoma mexicanum (AmexG_v6) -Axolotl
Odontesthes bonariensis - pejerrey (fOdoBon6.hap1)
Salmo salar (Ssal_v3.1) -Atlantic salmon
Camelus dromedarius (Arabian camel) - GCA_000803125.3
Falco rusticolus (gyrfalcon) - GCA_015220075.1
Sturnira Hondurensis (GCA_014824575.2) - Honduran Yellow-shouldered Bat
Bos taurus breed Jersey (GCA_021234555.1) - cattle
Bos taurus Brown Swiss Cow (GCA_914753205.1) - cattle
Larimichthys polyactis (GCA_018985215.1) - Small Yellow Croaker
Monodelphis domestica (GCA_000002295.1) - Gray short-tailed opossum
Micropterus salmoides (GCF_014851395.1) - largemouth bass
Carassius gibelio strain clone F (GCA_019843895.2) - silver crucian carp
Scophthalmus maximus (ASM1334776v1) - turbot
Bos taurus ARS UCD2.0 (GCF_002263795.3) - Cow
Columba livia (GCF_036013475.1) - Rock pigeon
Acomys cahirinus - African spiny mouse (zenodo.org)
Mus musculus (mm39) - Mouse