CRISPR RGEN Tools (original) (raw)

Homo sapiens (GRCh38/hg38) - Human

Homo sapiens (hg19) - Human

Mus musculus (mm10) - Mouse

Bos taurus (bosTau7) - Cow

Canis familiaris (canFam3) - Dog

Rattus norvegicus (rn5) - Rat

Sus scrofa (susScr11) - Pig

Danio rerio (danRer7) - Zebrafish

Macaca mulatta(rheMac3) - Monkey

Xenopus tropicalis (JGI 4.2/xenTro3) - Western clawed frog

Xenopus tropicalis (JGI 7.1) - Western clawed frog

Xenopus laevis (JGI 7.1) - African clawed frog

Cricetulus griseus (v1.0) - Chinese Hamster

Xenopus tropicalis (JGI 8.0) - Western clawed frog

Xenopus tropicalis (JGI 9.0) - Western clawed frog

Xenopus laevis (JGI 9.1) - African clawed frog

Macaca fascicularis (5.0) - Crab-eating macaque

Danio rerio (GRCz10) - Zebrafish

Rattus norvegicus (Rnor 6.0) - Rat

Equus caballus (EquCab2) - Horse

Oryctolagus cuniculus (OryCun2) - Rabbit

Mesocricetus auratus (MesAur1.0) - Golden hamster

Felis catus (6.2) - Cat

Mochrtus ochrogaster (AHZW01) - Prairie vole

Bos taurus (bosTau8) - Cow

Callithrix jacchus (calJac3) -marmoset

Pimephales promelas (SOAPdenovo v. 2) - fathead minnow

ovis_aries (Oar_v3.1) - sheep

Chlorocebus_sabeus (AQIB01) - green monkey

Gallus gallus (Galgal4) - Chicken

Oreochromis niloticus (ASM185804v2)

Capra hircus (ARS1) - goat

Peromyscus maniculatus (Pman_1.0) - North American deer mouse

Macaca mulatta (Mmul_8.0.1) - Monkey

Cricetulus griseus (CriGri_1.0) - Chinese hamster

Cavia porcellus (Cavpor3.0) -guinea pig

Danio rerio (GRCz11) - zebrafish

Mus musculus (mm9) - Mouse

Anas platyrhynchos (BGI_duck_1.0) - duck

Gallus gallus (Gallus_gallus-5.0) - Chicken

Salmo salar (ICSASG_v2) -Atlantic salmon

Cyprinus carpio (common carp genome)

Oncorhynchus tshawytscha (Otsh_v1.0) - Chinook salmon

Human Mitochondria genome (NC_012920.1)

BalbC/J mouse Mitochondria genome (AJ512208.1)

Bos taurus (ARS UCD1.2)

Paralichthys olivaceus (Flounder_ref_guided_V1.0)

Myotis lucifugus (Myoluc2.0)

Rousettus aegyptiacus (Raegyp2.0)

Tree shrew (TS_20 long-read)

Ambystoma mexicanum (ASM291563v2) -axolotl

Gallus gallus (GRCg6a) - chicken

Ictalurus punctatus (GCA_001660625.3) - Channel catfish

Mustela putorius furo (MusPutFur1.0) - Ferret

Erinaceus_europaeus (GCF_000296755.1)

Macaca mulatta (Mmul_10)

Macaca fascicularis (Macaca_fascicularis_5.0)

Pagrus major (Pmaj_1.0)

Petromyzon_marinus ()

Homo sapiens (CHM13 T2T v1.1) - Human

Ovis aries (ARS-UI_Ramb_v2.0) - Sheep

Equus caballus (EquCab3.0) - horse

Epinephelus coioides () - Orange-spotted grouper

Anabas testudineus (fAnaTes1.2) - Climbing perch

Bubalus bubalis (NDDB_SH_1)

Sus scrofa (Large white v1 from ensembl) - pig

Homo sapiens (T2T_CHM13v2) - Human

Salmo salar (USDA_NASsal_1.1) - Atlantic salmon

Vulpes lagopus (ASM1834538v1) - Arctic fox

Takifugu rubripes (fTakRub1.3 from ENA)

Macaca nemestrina (Mnem_1.0)

Eptesicus fuscus (EptFus1.0) - Big brown bat

Pteropus alecto (ASM32557v1) - Black flying fox

Oncorhynchus mykiss (USDA_OmykA_1.1) - rainbow trout

Macaca fascicularis (6.0) - Crab-eating macaque

Dicentrarchus labrax - (European seabass)

Equus asinus (ASM1607732v2) - Ass

Nothobranchius furzeri - Turquoise killifish

Elephas maximus indicus - Indian elephant

Labeo rohita (GCF_022985175.1) - Rohu

Anolis sagrei - Brown anole

Eublepharis macularius - Leopard gecko

Callithrix jacchus (calJac4) -marmoset

Epinephelus lanceolatus - Giant grouper

Rattus norveticus (Norway rat) - (GCF_015227675.2)

Ambystoma mexicanum (AmexG_v6) -Axolotl

Odontesthes bonariensis - pejerrey (fOdoBon6.hap1)

Salmo salar (Ssal_v3.1) -Atlantic salmon

Camelus dromedarius (Arabian camel) - GCA_000803125.3

Falco rusticolus (gyrfalcon) - GCA_015220075.1

Sturnira Hondurensis (GCA_014824575.2) - Honduran Yellow-shouldered Bat

Bos taurus breed Jersey (GCA_021234555.1) - cattle

Bos taurus Brown Swiss Cow (GCA_914753205.1) - cattle

Larimichthys polyactis (GCA_018985215.1) - Small Yellow Croaker

Monodelphis domestica (GCA_000002295.1) - Gray short-tailed opossum

Micropterus salmoides (GCF_014851395.1) - largemouth bass

Carassius gibelio strain clone F (GCA_019843895.2) - silver crucian carp

Scophthalmus maximus (ASM1334776v1) - turbot

Bos taurus ARS UCD2.0 (GCF_002263795.3) - Cow

Columba livia (GCF_036013475.1) - Rock pigeon

Acomys cahirinus - African spiny mouse (zenodo.org)

Mus musculus (mm39) - Mouse