Unico: Unified Cross-Omics Deconvolution (original) (raw)
UNIfied Cross-Omics deconvolution (Unico) deconvolves standard 2-dimensional bulk matrices of samples by features into a 3-dimensional tensors representing samples by features by cell types. Unico stands out as the first principled model-based deconvolution method that is theoretically justified for any heterogeneous genomic data. For more details see Chen and Rahmani et al. (2024) <doi:10.1101/2024.01.27.577588>.
| Version: | 0.1.0 |
|---|---|
| Depends: | R (≥ 4.0.0) |
| Imports: | compositions, config, data.table, futile.logger, MASS, matrixcalc, matrixStats, mgcv, nloptr, parallel, pbapply, pracma, stats, testit, utils |
| Suggests: | egg, hexbin, knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2024-02-26 |
| DOI: | 10.32614/CRAN.package.Unico |
| Author: | Zeyuan Chen [aut, cre], Elior Rahmani [aut] |
| Maintainer: | Zeyuan Chen |
| BugReports: | https://github.com/cozygene/Unico/issues |
| License: | GPL-3 |
| URL: | https://cozygene.github.io/Unico/ |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | Unico results |
Documentation:
Downloads:
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=Unicoto link to this page.