eggCounts: Hierarchical Modelling of Faecal Egg Counts (original) (raw)
An implementation of Bayesian hierarchical models for faecal egg count data to assess anthelmintic efficacy. Bayesian inference is done via MCMC sampling using 'Stan' <https://mc-stan.org/>.
Version:
2.5-1
Depends:
R (≥ 3.4.0), Rcpp (≥ 0.12.0)
Imports:
methods, utils, rstan (≥ 2.26), rstantools (≥ 2.3.1), boot, coda, numbers, lattice, rootSolve
LinkingTo:
rstan (≥ 2.26), Rcpp (≥ 1.0.7), BH (≥ 1.75.0), StanHeaders (≥ 2.26.0), RcppEigen (≥ 0.3.3.9.1), RcppParallel (≥ 5.1.4)
Suggests:
eggCountsExtra, R.rsp, testthat
Published:
2025-08-24
DOI:
10.32614/CRAN.package.eggCounts
Author:
Craig Wang 
[aut, cre], Michaela Paul [aut], Tea Isler [ctb], Reinhard Furrer [ctb], Zhixuan Li [ctb], Trustees of Columbia University [cph] (src/init.cpp, tools/make_cc.R, R/stanmodels.R)
Maintainer:
Craig Wang
License:
URL:
https://www.math.uzh.ch/pages/eggcount/
NeedsCompilation:
yes
SystemRequirements:
GNU make
Additional_repositories:
https://craigwangstat.github.io/eggCountsExtra-package/
Citation:
Materials:
CRAN checks: