Minor bug fix that resulted in occasional errors on Windows machines
Minor updates to documentation
Minor tweak to dependencies
Fixed problem that resulted inretrieve_calanguize_genomes() wiping out the target folder
CALANGO 1.0.14
Regular maintenance update:
Updated documentation, added links to published paper.
CALANGO 1.0.13
Regular maintenance update:
Fixed Vignette listing. Added examples page as a full vignette.
CALANGO 1.0.12
Regular maintenance update:
Added a second set of examples under Vignette “Usage Examples”.
Updated project home page, minor updates to documentation.
Minor changes to Rmd files to prevent pandoc errors.
CALANGO 1.0.10
Regular maintenance update:
Updated project home page, minor updates to documentation.
CALANGO 1.0.8
Regular maintenance update:
Minor internal changes to ensure compatibility with dendextend v1.15.2.
Changed naming standard of report plots to increase Windows compatibility: file names of correlation plots and boxplots now use “_” rather than “:”.
CALANGO 1.0.5
Regular maintenance update:
Tested compatibility with taxize v1.0: OK
Added function retrieve_calanguize_genomes() to enable users to quickly retrieve the calanguize_genomes Perl script, which is useful for preparing data to be used with CALANGO
Removed input attribute url from function_retrieve_data_files()_. This does not break existing code - ifurl is passed it will just be ignored.
Updated package logo in all documentation.
CALANGO 1.0.2
Initial CRAN release: Provides a small number of user-facing functions to:
Perform sophisticated association analyses between annotation terms and quantitative genotypes/phenotypes
Generate a full analysis website containing that can be easily shared with collaborators or the wider research community.