Fluidigm: Handling Fluidigm Data (original) (raw)
Designed to streamline the process of analyzing genotyping data from Fluidigm machines, this package offers a suite of tools for data handling and analysis. It includes functions for converting Fluidigm data to format used by 'PLINK', estimating errors, calculating pairwise similarities, determining pairwise similarity loci, and generating a similarity matrix.
| Version: | 0.2 |
|---|---|
| Imports: | data.table (≥ 1.9.4), graphics, grDevices, reshape (≥ 0.8.8), stats, utils |
| Suggests: | knitr, rmarkdown, testthat, digest |
| Published: | 2024-03-12 |
| DOI: | 10.32614/CRAN.package.Fluidigm |
| Author: | Daniel Fischer  [aut, cre], Helena Johansson [ctb, fnd], Robert Ekblom [aut] |
| Maintainer: | Daniel Fischer <Daniel.Fischer at luke.fi> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| SystemRequirements: | perl (>= 5.10.0), plink (>=1.07) |
| Materials: | README |
| CRAN checks: | Fluidigm results |
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