HybridMicrobiomes: Analysis of Host-Associated Microbiomes from Hybrid Organisms (original) (raw)
A set of tools to analyze and visualize the relationships between host-associated microbiomes of hybrid organisms and those of their progenitor species. Though not necessary, installing the microViz package is recommended as a check for phyloseq objects. To install microViz from R Universe use the following command: install.packages("microViz", repos = c(davidbarnett = "https://david-barnett.r-universe.dev", getOption("repos"))). To install microViz from GitHub use the following commands: install.packages("devtools") followed by devtools::install_github("david-barnett/microViz").
| Version: | 0.1.1 |
|---|---|
| Imports: | rgl, compositions, rlang, PERMANOVA, graphics, stats, vegan, ks, ape, geometry, StereoMorph, phyloseq |
| Suggests: | microViz |
| Published: | 2023-12-05 |
| DOI: | 10.32614/CRAN.package.HybridMicrobiomes |
| Author: | Benjamin Camper [aut], Zachary Lauglin [ctb], Daniel Malagon [ctb], Robert Denton [ctb], Sharon Bewick [aut, cre], National Science Foundation Division of Integrative Organismal Systems (award #2104605) [fnd], Clemson University Support for Early Exploration and Development (CU SEED) Grant [fnd] |
| Maintainer: | Sharon Bewick |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | HybridMicrobiomes results |
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