ISOpureR: Deconvolution of Tumour Profiles (original) (raw)
Deconvolution of mixed tumour profiles into normal and cancer for each patient, using the ISOpure algorithm in Quon et al. Genome Medicine, 2013 5:29. Deconvolution requires mixed tumour profiles and a set of unmatched "basis" normal profiles.
| Version: | 1.1.3 |
|---|---|
| Depends: | R (≥ 3.1.1) |
| Imports: | Rcpp (≥ 0.11.3), stats, futile.logger |
| LinkingTo: | Rcpp, RcppEigen (≥ 0.3.2.2.0) |
| Suggests: | knitr |
| Published: | 2019-05-11 |
| DOI: | 10.32614/CRAN.package.ISOpureR |
| Author: | Gerald Quon [aut], Catalina V Anghel [aut, trl], Syed Haider [aut], Francis Nguyen [aut], Amit G Deshwar [aut], Quaid D Morris [aut], Paul C Boutros [aut, cre] |
| Maintainer: | Paul C Boutros |
| License: | GPL-2 |
| NeedsCompilation: | yes |
| Materials: | |
| CRAN checks: | ISOpureR results |
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