LCMSQA: Liquid Chromatography/Mass Spectrometry (LC/MS) Quality Assessment (original) (raw)
The goal of 'LCMSQA' is to make it easy to check the quality of liquid chromatograph/mass spectrometry (LC/MS) experiments using a 'shiny' application. This package provides interactive data visualizations for quality control (QC) samples, including total ion current chromatogram (TIC), base peak chromatogram (BPC), mass spectrum, extracted ion chromatogram (XIC), and feature detection results from internal standards or known metabolites.
| Version: | 1.0.2 |
|---|---|
| Depends: | R (≥ 4.0.0) |
| Imports: | bsplus, data.table, DT, ggplot2, methods, plotly, shiny, shinycssloaders, shinyjs, shinyWidgets |
| Suggests: | BiocManager, xcms, MSnbase, knitr, rmarkdown |
| Published: | 2024-01-12 |
| DOI: | 10.32614/CRAN.package.LCMSQA |
| Author: | Jaehyun Joo [aut, cre], Blanca Himes [aut] |
| Maintainer: | Jaehyun Joo |
| License: | GPL (≥ 3) |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| In views: | ChemPhys |
| CRAN checks: | LCMSQA results |
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