MicroMoB: Discrete Time Simulation of Mosquito-Borne Pathogen Transmission (original) (raw)
Provides a framework based on S3 dispatch for constructing models of mosquito-borne pathogen transmission which are constructed from submodels of various components (i.e. immature and adult mosquitoes, human populations). A consistent mathematical expression for the distribution of bites on hosts means that different models (stochastic, deterministic, etc.) can be coherently incorporated and updated over a discrete time step.
| Version: | 0.1.2 |
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| Imports: | abind, jsonlite |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0), ggplot2, data.table, callr, httr, readr, withr, plumber |
| Published: | 2023-01-17 |
| DOI: | 10.32614/CRAN.package.MicroMoB |
| Author: | Sean L. Wu  [aut, cre], David L. Smith [aut], Sophie Libkind [ctb] |
| Maintainer: | Sean L. Wu |
| BugReports: | https://github.com/dd-harp/MicroMoB/issues |
| License: | MIT + file |
| URL: | https://dd-harp.github.io/MicroMoB/,https://github.com/dd-harp/MicroMoB |
| NeedsCompilation: | yes |
| Materials: | README, NEWS |
| CRAN checks: | MicroMoB results |
Documentation:
| Reference manual: | MicroMoB.html , <MicroMoB.pdf> |
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| Vignettes: | Advanced topics (source, R code) Beverton-Holt aquatic model (source, R code) Simple behavioral state mosquito model (source, R code) Contributing (source, R code) Queueing model for human superinfection (source, R code) Micro-MoB (Microsimulation for mosquito-borne pathogens) (source, R code) Ross-Macdonald mosquito model (source, R code) Ross-Macdonald transmission model (source, R code) Blood feeding (source, R code) |
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