TCGAretriever: Retrieve Genomic and Clinical Data from CBioPortal Including TCGA Data (original) (raw)
The Cancer Genome Atlas (TCGA) is a program aimed at improving our understanding of Cancer Biology. Several TCGA Datasets are available online. 'TCGAretriever' helps accessing and downloading TCGA data hosted on 'cBioPortal' via its Web Interface (see <https://www.cbioportal.org/> for more information).
| Version: | 1.9.1 |
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| Depends: | R (≥ 3.5.0) |
| Imports: | httr, reshape2, jsonlite |
| Suggests: | stats, utils, knitr, rmarkdown, ggplot2, dplyr |
| Published: | 2024-01-23 |
| DOI: | 10.32614/CRAN.package.TCGAretriever |
| Author: | Damiano Fantini |
| Maintainer: | Damiano Fantini <damiano.fantini at gmail.com> |
| License: | GPL-3 |
| URL: | https://www.data-pulse.com/dev_site/TCGAretriever/ |
| NeedsCompilation: | no |
| In views: | Omics |
| CRAN checks: | TCGAretriever results |
Documentation:
| Reference manual: | TCGAretriever.pdf |
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| Vignettes: | Getting Started with TCGAretriever |
Downloads:
| Package source: | TCGAretriever_1.9.1.tar.gz |
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| Windows binaries: | r-devel: TCGAretriever_1.9.1.zip, r-release: TCGAretriever_1.9.1.zip, r-oldrel: TCGAretriever_1.9.1.zip |
| macOS binaries: | r-release (arm64): TCGAretriever_1.9.1.tgz, r-oldrel (arm64): TCGAretriever_1.9.1.tgz, r-release (x86_64): TCGAretriever_1.9.1.tgz, r-oldrel (x86_64): TCGAretriever_1.9.1.tgz |
| Old sources: | TCGAretriever archive |
Linking:
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