avidaR: A Computational Biologist’s Toolkit To Get Data From 'avidaDB' (original) (raw)

Easy-to-use tools for performing complex queries on 'avidaDB', a semantic database that stores genomic and transcriptomic data of self-replicating computer programs (known as digital organisms) that mutate and evolve within a user-defined computational environment.

Version: 1.2.1
Depends: R (≥ 3.6.0)
Imports: base64enc (≥ 0.1-3), xml2 (≥ 1.3.2), httr (≥ 1.4.2), dplyr (≥ 1.0.6), readr (≥ 1.4.0), tidyr (≥ 1.1.2), tibble (≥ 3.0.6), circlize (≥ 0.4.11), RColorBrewer, R6, curl (≥ 5.0.2)
Suggests: testthat (≥ 3.0.0)
Published: 2024-06-21
DOI: 10.32614/CRAN.package.avidaR
Author: Miguel A. Fortuna ORCID iD [aut], Raúl Ortega ORCID iD [cre]
Maintainer: Raúl Ortega <raul.ortega at ebd.csic.es>
License: MIT + file
URL: https://gitlab.com/fortunalab/avidaR
NeedsCompilation: no
Language: en-US
Materials: README, NEWS
CRAN checks: avidaR results

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